PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA17G00121
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 137aa    MW: 15459.1 Da    PI: 5.3419
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA17G00121genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-202070255
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIrd    + + +r++lg+f taeeAa+a+++a+ +++g
  AA17G00121 20 KYRGVRKRP-WGKYAAEIRDS---NrHGARVWLGTFNTAEEAARAYDKAAFSMRG 70
                8********.**********4...3234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.14E-282078No hitNo description
PROSITE profilePS5103223.9862078IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-232080IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-322080IPR001471AP2/ERF domain
PfamPF008472.6E-152070IPR001471AP2/ERF domain
SMARTSM003801.0E-352084IPR001471AP2/ERF domain
PRINTSPR003678.1E-122132IPR001471AP2/ERF domain
PRINTSPR003678.1E-124460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MEHKNRSKES SSYSSTCEVK YRGVRKRPWG KYAAEIRDSN RHGARVWLGT FNTAEEAARA  60
YDKAAFSMRG QRAILNFPQE YPMARESPVC ENEAVAAAAS SAGGVGKEVI EFEYFDDGLL  120
EELLEYGENY ENQRCLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-362011914114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA17G00121
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013597298.12e-50PREDICTED: ethylene-responsive transcription factor ERF095
SwissprotQ9LTC67e-36ERF95_ARATH; Ethylene-responsive transcription factor ERF095
TrEMBLA0A0D3D5K14e-49A0A0D3D5K1_BRAOL; Uncharacterized protein
TrEMBLA0A3P6ELV94e-49A0A3P6ELV9_BRAOL; Uncharacterized protein
STRINGBostr.19424s0321.1.p1e-51(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.11e-32ERF family protein
Publications ? help Back to Top
  1. Quan R, et al.
    EIN3 and SOS2 synergistically modulate plant salt tolerance.
    Sci Rep, 2017. 7: p. 44637
    [PMID:28300216]