PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA1G00030
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family NAC
Protein Properties Length: 227aa    MW: 26025.2 Da    PI: 6.8881
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA1G00030genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.91.3e-12550348
        NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
               +Gf F+Pt+ elv +yL+ k++g++  + e+i+e+diy+++Pw+L+
  AA1G00030  5 VGFGFRPTEAELVGYYLRYKLTGSTSFVGETINEIDIYSFDPWELR 50
               6************************888899**************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS51005101109IPR003441NAC domain
SuperFamilySSF1019412.62E-204109IPR003441NAC domain
PfamPF023655.6E-8591IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MGGRVGFGFR PTEAELVGYY LRYKLTGSTS FVGETINEID IYSFDPWELR LINRLGKRLL  60
DSGRLADNLG FHKGRIVRPG KADWVMHEYH LTIVPENKRT HVLCKVEYKG DDISFLYDNT  120
TKFSPAFYKQ PSINGGSPFN TQTHGHLSHF PLDNDFSEID FGEISDSNSE ASVGNPNELC  180
FTPILQLGTV DQSTIGREQY GEEYNNYKAQ ELKIELKGKE KMKRRWR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA1G00030
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM76581640
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01010.15e-29NAC domain containing protein 1