PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AA210G00005

Organism

Aethionema arabicum

Taxonomic ID

228871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema

Family

bZIP

Protein Properties

Length: 444aa MW: 47704.5 Da PI: 8.8777

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AA210G00005	genome	VEGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.3	2e-14	344	392	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+ + e+ AA210G00005 344 RRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEENERLQRKQAEIL 392 79*************************************9976544443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.7E-15	334	403	No hit	No description
SMART	SM00338	1.0E-14	340	405	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.346	342	391	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.9E-12	344	394	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-11	344	393	No hit	No description
CDD	cd14707	1.05E-28	344	398	No hit	No description
PROSITE pattern	PS00036	0	347	362	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence Send to blast
MGSQLNFKNL GNEPPGDGGG GMNRLSQGNT PLTRQGSIYS LTFDEFQSSL GKDFGSLNMD 60 ELLKNIWSAE ETQAMASTSG IPVSGQDGLQ RQGSLTLPRT LSQKTVDEVW KDLSKEYISG 120 KDRGVGGTNM SQTHTQRQQT LGEVTLEEFL VRAGVVREEN QMASNLKPDK GGFFGNPLPA 180 SASPVRFQQA SGVAASLMTN LGPDAANHMQ GQGSSLPLNV NGVRLIDQQH HCVQQQPIMP 240 KQPGFGYGTK IGLPNGQVTN PGIRSGLMGV GDHSLTNNMG LVQGGLGLTG AVGVGAVSPV 300 TPLSSEGIGK SNGDSSSLSP SPYMFNGGVR GRKSSGVVEK VVERRQRRMI KNRESAARSR 360 ARKQAYTVEL EAEVAKLKEE NERLQRKQAE ILEMQKNQLN NYLIANIFKV MNLVVYATGD 420 GDDESSRRAA EKAEEDAVRS LVNE

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence Send to blast

MGSQLNFKNL GNEPPGDGGG GMNRLSQGNT PLTRQGSIYS LTFDEFQSSL GKDFGSLNMD  60
ELLKNIWSAE ETQAMASTSG IPVSGQDGLQ RQGSLTLPRT LSQKTVDEVW KDLSKEYISG  120
KDRGVGGTNM SQTHTQRQQT LGEVTLEEFL VRAGVVREEN QMASNLKPDK GGFFGNPLPA  180
SASPVRFQQA SGVAASLMTN LGPDAANHMQ GQGSSLPLNV NGVRLIDQQH HCVQQQPIMP  240
KQPGFGYGTK IGLPNGQVTN PGIRSGLMGV GDHSLTNNMG LVQGGLGLTG AVGVGAVSPV  300
TPLSSEGIGK SNGDSSSLSP SPYMFNGGVR GRKSSGVVEK VVERRQRRMI KNRESAARSR  360
ARKQAYTVEL EAEVAKLKEE NERLQRKQAE ILEMQKNQLN NYLIANIFKV MNLVVYATGD  420
GDDESSRRAA EKAEEDAVRS LVNE

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	AA210G00005

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010538116.1	1e-173	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_010538117.1	1e-173	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-166	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1P8AV75	1e-163	A0A1P8AV75_ARATH; Abscisic acid responsive elements-binding factor 2
STRING	XP_010538116.1	1e-172	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM734	27	129

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-122	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]