PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA31G00259
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 116aa    MW: 12893.9 Da    PI: 11.1125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA31G00259genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192373155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++aa++ ++g
  AA31G00259 23 PVYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDAAALTIKG 73
                68*****998.**********843...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-132373IPR001471AP2/ERF domain
PROSITE profilePS5103222.9722481IPR001471AP2/ERF domain
SMARTSM003801.1E-352487IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-332482IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-222482IPR016177DNA-binding domain
PRINTSPR003678.4E-112536IPR001471AP2/ERF domain
CDDcd000184.14E-222583No hitNo description
PRINTSPR003678.4E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MTELSSPIKQ ETRPNKKRVR PDPVYRGVRM RTWGKWVSEI REPRKKSRIW LGTFSTPEMA  60
ARAHDAAALT IKGNSAVLNF PELATYLPRP ASTSPRDVQA AAAVAAAMDF SSDLVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1925821573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA31G00259
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004136219.13e-51PREDICTED: ethylene-responsive transcription factor ERF043-like
SwissprotO806542e-47ERF37_ARATH; Ethylene-responsive transcription factor ERF037
TrEMBLA0A0A0LHV38e-50A0A0A0LHV3_CUCSA; AP2 domain class transcription factor
STRINGXP_004136219.11e-50(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18528283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77200.12e-48ERF family protein