PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA31G00384
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family C2H2
Protein Properties Length: 395aa    MW: 43352.3 Da    PI: 9.5419
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA31G00384genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2156.9e-05194216223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  C+ Cg++F+  ++L+ H+ + H
  AA31G00384 194 ACSQCGEVFPKLESLELHQAVrH 216
                 6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.221193221IPR007087Zinc finger, C2H2
PROSITE patternPS000280193216IPR007087Zinc finger, C2H2
SuperFamilySSF563994.22E-18218391No hitNo description
Gene3DG3DSA:3.90.228.101.3E-6320391IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MALLTFLPEN ADSHKRNNIP PSSKRKKRDN PTDTKQPHKP QKPQKPQKTQ KPQKQASSWD  60
QFKNLLTCKQ IEGSTVHDPS KLGSSCSSIC SFRDVAHGNT RVVHRADNSP DVANSVVDSE  120
SRLITRKPGQ HGSSSSSRSL TSGSTRSNGG GSYTSSSTTT SSFRSMQFRK LSGCYECHMI  180
VDPSRYPISP RVCACSQCGE VFPKLESLEL HQAVRHAGPE DSGRNIVEII FKSSWLKKDS  240
PICKIERILK VHNTQRTIQR FEDCRDAVKA RALQSTRKDA RCAADGNELL RFHCTTLTCA  300
IGSRGSSSLC PNLPNCGVCT ARRVMLVCRV IAGRVKRVDP TVTEAPAVVE ESACGGAYDS  360
VAVNAGVYSN LEELVVFNPR AILPCFVVIY KVLES
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA31G00384
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010428604.10.0PREDICTED: uncharacterized protein LOC104713223
TrEMBLD7KT600.0D7KT60_ARALL; Zinc finger family protein
STRINGXP_010428604.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19162880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.10.0C2H2-like zinc finger protein