PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA31G00568
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family EIL
Protein Properties Length: 579aa    MW: 65545.3 Da    PI: 5.0673
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA31G00568genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34325.7e-132313951352
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 e+l+krmwkd+++lkr+ker+k        ++ +++ +k+++qa+rkkmsraQDgiLkYMlk mevc+++GfvYgiipekgkpv+g+sd++raWWkekv
  AA31G00568  31 EDLEKRMWKDRVRLKRIKERQKIGS-----QVTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKV 124
                 89****************9999632.....35677899************************************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198
                 +fd+ngpaai+ky+ ++l++++++++    ++++  l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e+ww +lgl+k+q  ppykkp
  AA31G00568 125 KFDKNGPAAIAKYEEECLAFGKSDGN----RMSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQT-PPYKKP 218
                 ********************988877....7899*******************************************************998.9***** PP

                 GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX...XXXX...XXXXXXXXXXXXXXXXXXX CS
        EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss...slrk...qspkvtlsceqkedvegkk 288
                 hdlkk+wkv+vLtavi+hmsp+i++i++++rqsk+lqdkm+akes+++l+vlnqee+++++ s++   s+   ++r+   +++k ++ +++++dv+g +
  AA31G00568 219 HDLKKMWKVGVLTAVINHMSPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDngtSNvteTHRRgnaDRRKPVVMSDSDYDVDGAE 317
                 *****************************************************************654227773333455555555666669****555 PP

                 XXX.X..XXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXX CS
        EIN3 289 eskik..hvqavktta..................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqn 352
                 + + +   ++++++++                  +++ +r++k+++ +s  v       + +++q++ ++  ++++d+n+++ +
  AA31G00568 318 DASGSgsVSSKDNRRNqeppaatishsvrdkdkdKTEKHRRKKRPRIRSGNV------NQQEEEQLEIEQRDVVLPDMNHVDAH 395
                 5444411334444444899999999988876554555555555455555544......555899999999*********99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.6E-12531274No hitNo description
Gene3DG3DSA:1.10.3180.102.6E-71150282IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.94E-61155277IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MDFDRMDNEP DDLASDNVAE IEVSDEEIDA EDLEKRMWKD RVRLKRIKER QKIGSQVTKE  60
TPKKISDQAQ RKKMSRAQDG ILKYMLKLME VCKVRGFVYG IIPEKGKPVS GSSDNIRAWW  120
KEKVKFDKNG PAAIAKYEEE CLAFGKSDGN RMSQFVLQDL QDATLGSLLS SLMQHCDPPQ  180
RKYPLEKGTP PPWWPTGNEE WWVKLGLPKS QTPPYKKPHD LKKMWKVGVL TAVINHMSPD  240
IAKIKRHVRQ SKCLQDKMTA KESAIWLAVL NQEESLIQQP SSDNGTSNVT ETHRRGNADR  300
RKPVVMSDSD YDVDGAEDAS GSGSVSSKDN RRNQEPPAAT ISHSVRDKDK DKTEKHRRKK  360
RPRIRSGNVN QQEEEQLEIE QRDVVLPDMN HVDAHMLEYN IGEGVVEPNI ALGLVENGLD  420
NHSQLVAPDF DNNNYSYLPS VDEMPAQTMI PVQERPMIYG PNANPELQYG SGYNFYNPSS  480
VFVHNQEEDI HTQLEMNVPA PNSSFEAPGG LQPVGLHGNE NGTSGDLPIL QNEQDKLLDT  540
NILSPFHDLP FDTGTFYSGF DTYGAFDDEF DKDFSWFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-851542859140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1347359KDKDKTEKHRRKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA31G00568
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006390517.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLE4MXJ80.0E4MXJ8_EUTHA; mRNA, clone: RTFL01-23-B16
TrEMBLV4KKK70.0V4KKK7_EUTSA; Uncharacterized protein
STRINGXP_006390517.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46582548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]