PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA33G00018
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family NAC
Protein Properties Length: 279aa    MW: 32258.1 Da    PI: 8.0659
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA33G00018genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM149.81.3e-4681343128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 
                 pGfrFhPt+eel+++yLk+ + gk+  + evi  ++iy+++PwdLp   + +e+ewyfF++r++k+ +g r++r+t++gyWkatg+d+++++    +++
  AA33G00018   8 PGFRFHPTEEELLDFYLKNMIYGKRSCI-EVIGFLNIYRHDPWDLPGLSRIGEREWYFFVPRERKHGNGGRPSRTTDKGYWKATGSDRKIITLsePKRV 105
                 9************************888.99***************7777899*************************************986557788 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +glkktLvfykgrap g+ktdWvm+eyr+
  AA33G00018 106 IGLKKTLVFYKGRAPGGNKTDWVMNEYRM 134
                 ***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100553.6976152IPR003441NAC domain
SuperFamilySSF1019419.94E-567152IPR003441NAC domain
PfamPF023653.9E-258134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAKEIDLPGF RFHPTEEELL DFYLKNMIYG KRSCIEVIGF LNIYRHDPWD LPGLSRIGER  60
EWYFFVPRER KHGNGGRPSR TTDKGYWKAT GSDRKIITLS EPKRVIGLKK TLVFYKGRAP  120
GGNKTDWVMN EYRMPDNCTI PKDVVLCKIY RKATSLKVLE QRAEMEAKMM NQTYPNSPLS  180
SPETNSSIGK EEDLKTSFFV HQTAMEEEAN EFLMIQEHKE DVKHEVKDIK EMSSSLKLPF  240
GGLPELQVPK PGPEWGPDQF LSLSPWLQNL TPIVNLLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-44815719170NO APICAL MERISTEM PROTEIN
1ut4_B1e-44815719170NO APICAL MERISTEM PROTEIN
1ut7_A1e-44815719170NO APICAL MERISTEM PROTEIN
1ut7_B1e-44815719170NO APICAL MERISTEM PROTEIN
3swm_A2e-44815722173NAC domain-containing protein 19
3swm_B2e-44815722173NAC domain-containing protein 19
3swm_C2e-44815722173NAC domain-containing protein 19
3swm_D2e-44815722173NAC domain-containing protein 19
3swp_A2e-44815722173NAC domain-containing protein 19
3swp_B2e-44815722173NAC domain-containing protein 19
3swp_C2e-44815722173NAC domain-containing protein 19
3swp_D2e-44815722173NAC domain-containing protein 19
4dul_A1e-44815719170NAC domain-containing protein 19
4dul_B1e-44815719170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA33G00018
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002884035.11e-164NAC domain-containing protein 35
SwissprotQ10S652e-88NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLD7L8Q91e-163D7L8Q9_ARALL; ANAC036
STRINGfgenesh2_kg.3__3291__AT2G17040.11e-164(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38992860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-164NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]