PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA39G00121
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family EIL
Protein Properties Length: 530aa    MW: 60956.7 Da    PI: 5.5723
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA39G00121genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3398.87e-122313611337
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 e+l+krmwkd ++lkr++er+k  +  ++   ++ k +k ++q++rkkmsraQDgiLkYMlk mevc+++GfvYgiipekgkpv+g+sd+LraWWkekv
  AA39G00121  31 EDLEKRMWKDHVRLKRIREREKLIV--QS---EKLKPKKNKDQSQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNLRAWWKEKV 124
                 89******************99765..22...34577899*********************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198
                 +fd+ng  ai+k++ ++l + +++++   + s++ +l++lqD+tlgSLLs+lmqhcdppqrr+plek ++pPWWP+G+e+ww +lgl k     py+kp
  AA39G00121 125 KFDKNGLEAIAKHEDECLSFVKSNGN---GISSQCMLQDLQDATLGSLLSSLMQHCDPPQRRYPLEKRIPPPWWPNGDEEWWVKLGLLKGET-APYRKP 219
                 *************9999999988887...88*******************************************************998876.8***** PP

                 GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX...XXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss...slrkqspkvtlsceqkedvegkkesk 291
                 hdlkk+wkv+vLtavikhm p+i++i++ +rqsk+lqdkm+akes+++lsvlnqee ++++ s++   s+   +lr+ ++ v    ++++dve  ++s 
  AA39G00121 220 HDLKKMWKVGVLTAVIKHMLPDIAKIKRYVRQSKCLQDKMTAKESAIWLSVLNQEEFLIQQSSSDngrSNvteTLRSWRKPVMSGHSDDYDVEHCSASV 318
                 ****************************************************************96542277677777777777778777777554444 PP

                 .XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX. CS
        EIN3 292 ikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgs 337
                    +++++++++++++  rk+k+s +   + ++v   + + ++++s
  AA39G00121 319 ---SSKDNRRNKAKLQTHRKRKRSGDVNLQVEQVEVEMGHVNMNSS 361
                 ...5667777777777777766766666666666555555555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048739.5E-11931275No hitNo description
Gene3DG3DSA:1.10.3180.105.9E-69151283IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-58156278IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MFDDRMENET YDLVGDNVVE IDVSDEEIDA EDLEKRMWKD HVRLKRIRER EKLIVQSEKL  60
KPKKNKDQSQ RKKMSRAQDG ILKYMLKLME VCKVRGFVYG IIPEKGKPVS GSSDNLRAWW  120
KEKVKFDKNG LEAIAKHEDE CLSFVKSNGN GISSQCMLQD LQDATLGSLL SSLMQHCDPP  180
QRRYPLEKRI PPPWWPNGDE EWWVKLGLLK GETAPYRKPH DLKKMWKVGV LTAVIKHMLP  240
DIAKIKRYVR QSKCLQDKMT AKESAIWLSV LNQEEFLIQQ SSSDNGRSNV TETLRSWRKP  300
VMSGHSDDYD VEHCSASVSS KDNRRNKAKL QTHRKRKRSG DVNLQVEQVE VEMGHVNMNS  360
SHQESDLQPS IALRLEDNGV EGQSLVQATE FDNNYSYPSS VDEIPGEAMI LLDERRLLYG  420
SGYSFYNPSP VLMHNHGEEL QKQREMDEPV PRNSRFEASM VLQPLPGLDG VEDDTTRRDL  480
VQSEQERLMD SNILSSLHDL QFDFDSLYNT EIGSDTTFDD LGVDTSYLGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-761552869140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA39G00121
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010537472.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLE4MXJ80.0E4MXJ8_EUTHA; mRNA, clone: RTFL01-23-B16
TrEMBLV4KKK70.0V4KKK7_EUTSA; Uncharacterized protein
STRINGXP_010537472.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46582548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]