PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA39G00226
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 464aa    MW: 51849.1 Da    PI: 6.3679
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA39G00226genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.43.5e-09151213163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+e +r +r   NRe+Ar   +R++a +eeL++k++ L+ eN  L+ e ++  ke ++l++ +
  AA39G00226 151 EREERRIKRILANRESARQTILRRQALCEELTRKAADLTYENGNLRREKDRALKEFQSLETIN 213
                 78899****************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-5148214No hitNo description
PfamPF001708.1E-8151213IPR004827Basic-leucine zipper domain
SMARTSM003382.2E-11151215IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.565153216IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-5155210No hitNo description
CDDcd147021.20E-14156207No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MELEAVSSCC SSSSPSVPSS STSREDVANR TELEAAEALA DLAQLAIMPE QAFESAVSWG  60
RKGKRVRKRV TDEFTRCDSP LKPADSEAIP GLDLSEEQTV KEEQDVQPIT RDLITVPVKS  120
EVDDETPKPY VPSALKCRSS GRSRQNLSEA EREERRIKRI LANRESARQT ILRRQALCEE  180
LTRKAADLTY ENGNLRREKD RALKEFQSLE TINKHLKEQV SKSVIHETKE PEESLKSSQV  240
EMSTSSTPVY FYNQNPFQLF YWPHITQSSD PTKSPLETQN GFTTPSATSG GSPPKIMTSQ  300
VHTNPGDEHG QNTPIYIVPC PWFLPPYQSS EVPTIVPLEL QDTQGAARIK EEDSCSTKTK  360
PLYDLNESAS EVLSEGGDTH PLTTFPNNQT FIFKHEDVSQ STNEVKPMAP GHHVLISLPT  420
KTQGFVECPS KKLVGSVAAA EARKRRKQLT RLKNLHGRQF QMQV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA39G00226
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006416500.21e-176light-inducible protein CPRF2
TrEMBLV4L5161e-174V4L516_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_006416500.11e-175(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM112112428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-151bZIP family protein