PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA39G00477
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 140aa    MW: 15420.2 Da    PI: 4.8732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA39G00477genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.1e-171161155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykG+r++k +g+Wv+eIr+p +   r r +lg+f tae+Aa a++ a  +l++
  AA39G00477 11 PKYKGIRRRK-WGKWVSEIRVPGT---RDRLWLGSFSTAEGAAVAHDVAFFCLHQ 61
                79*****998.**********943...5*********************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.07E-271173No hitNo description
PfamPF008477.5E-91159IPR001471AP2/ERF domain
PROSITE profilePS5103220.9691271IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-241272IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-171272IPR016177DNA-binding domain
SMARTSM003801.3E-311277IPR001471AP2/ERF domain
PRINTSPR003676.5E-91324IPR001471AP2/ERF domain
PRINTSPR003676.5E-93551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MDYRDAAETQ PKYKGIRRRK WGKWVSEIRV PGTRDRLWLG SFSTAEGAAV AHDVAFFCLH  60
QPISLDSLNF PHLVPPSIAS NTSPRSIQQA ASNAGMAVDA GIVLSNDTGN NEYEETTPYC  120
VNGETGEPLS ISVYDYIQDL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA39G00477
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002893249.11e-76ethylene-responsive transcription factor ERF019
SwissprotO805421e-69ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLD7KMJ82e-75D7KMJ8_ARALL; Uncharacterized protein
STRINGscaffold_102587.14e-76(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38652860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.14e-72ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]