PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA4G00240
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family EIL
Protein Properties Length: 536aa    MW: 62139.7 Da    PI: 4.5901
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA4G00240genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN32646.6e-81432401179
                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn..............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 
                ++lkkrmwkd++l+ + k++kk+  +  +++t  ++s+              ++ e++rrkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv+g
  AA4G00240  43 DDLKKRMWKDRNLMSKFKQQKKDFNGVVSTTTTDTSSSssspplplpsstniRRAEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTG 142
                79*********************988777764333333588*********************************************************** PP

                XXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
       EIN3  87 asdsLraWWkekvefdrngpaaisky...qaknlilsgessl..qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                +sdsLr+WWke+v+fd+++p+a+++y   +a++li+s+  +   + +++s+ h l+elqDTtlgSLLsalmqhc ppqrrfplekg +pPWWPtG+el
  AA4G00240 143 SSDSLRGWWKENVQFDQTAPNAVTDYitlAAAQLISSSVGEYpnSLDPNSYMHLLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGNAPPWWPTGREL 240
                *****************************9*****997655543789*************************************************96 PP
2EIN3737.8e-23241394203345
                HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXXXXXXXXXXX......XXXXXX... CS
       EIN3 203 kawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtlsceqkedve......gkkesk..i 292
                kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake+++++++lnqee+ +++++ +  + + +++s++  ++++q+   +      +++e++  +
  AA4G00240 241 KAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRILNQEESRLKQLKISddNDQESSRSKDKMIHDHQELPLNncflvaQDQETSfaM 340
                9*********************************************************999543333345555556666555554689976444444002 PP

                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XXXXXXX.XXXXXXXX CS
       EIN3 293 khvqavkttagfpvvrkrkkkpsesakvsskevsrt.cqssqfrgsetelifad 345
                k+ ++  +++ + v+++ +++  ++ k+ ++e s +  q++q r ++ +l++  
  AA4G00240 341 KDQESLLKERFLVVQDQEDQELIKKGKMINQESSLNqDQENQERAKDKRLVLDQ 394
                333333334466778899999999999988876544145566666666665554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.0E-8043240No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-23192239IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.07E-43194295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.102.8E-23241299IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.6E-18241292No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MVEFEELEPL SPIQYNSDEN DDENDDQNDE EFDRLSQEEI TYDDLKKRMW KDRNLMSKFK  60
QQKKDFNGVV STTTTDTSSS SSSPPLPLPS STNIRRAEAS RRKKMARSQD SVLKYMMKIM  120
EVCKAQGFVY GIVPEKGKPV TGSSDSLRGW WKENVQFDQT APNAVTDYIT LAAAQLISSS  180
VGEYPNSLDP NSYMHLLHEL QDTTLGSLLS ALMQHCVPPQ RRFPLEKGNA PPWWPTGREL  240
KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRILNQ EESRLKQLKI  300
SDDNDQESSR SKDKMIHDHQ ELPLNNCFLV AQDQETSFAM KDQESLLKER FLVVQDQEDQ  360
ELIKKGKMIN QESSLNQDQE NQERAKDKRL VLDQEPSLNS CFLVEQEDQE VYGNKRKNEF  420
EEQGGSRWRS SNNLYTYQNW LEDMPSTNNT TTSDEDYSAG SSSKPEDNYN NNINDHENDN  480
WLDYLWFERL HNLNCSDHTS SNIVVDLNQF PNQSHDSNHE DISLWDMGCE DNNMYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-431922981130Protein ETHYLENE INSENSITIVE 3
4zds_B4e-431922981130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA4G00240
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006281975.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ50.0EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLR0GUK90.0R0GUK9_9BRAS; Uncharacterized protein
STRINGXP_006281975.10.0(Capsella rubella)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.10.0EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]