PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AA53G00793

Organism

Aethionema arabicum

Taxonomic ID

228871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema

Family

bZIP

Protein Properties

Length: 186aa MW: 21871.7 Da PI: 6.6999

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AA53G00793	genome	VEGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.6	1e-16	96	152	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +++rr+++NRe+ArrsR RK+ ++eL vk L +eN++L+++ ++l+++ +++ AA53G00793 96 RKQRRMISNRESARRSRMRKQRHLDELWSQVKRLRNENHSLIDKFNNLSETHDSVLL 152 79***********************************************99887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.9E-15	92	156	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-12	93	146	No hit	No description
PROSITE profile	PS50217	11.001	94	145	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.45E-13	96	146	No hit	No description
Pfam	PF00170	2.2E-14	96	151	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.78E-19	97	148	No hit	No description
PROSITE pattern	PS00036	0	99	114	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence Send to blast
MNPAEISGYF QYLSPENSSN IPSEFNMINL PSSPTSSSSF YYLNDLINYS SSSNGQDLII 60 MSNNSTSGDE DHHHHHHQHQ HHEHHHDDHE IVNDERKQRR MISNRESARR SRMRKQRHLD 120 ELWSQVKRLR NENHSLIDKF NNLSETHDSV LLHNSKLQQQ VSQLRHLVSQ LQSNNNNGFV 180 TELEDF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	115	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	AA53G00793

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013613647.1	2e-74	PREDICTED: basic leucine zipper 43
TrEMBL	A0A0D3AVT9	5e-73	A0A0D3AVT9_BRAOL; Uncharacterized protein
STRING	Bo2g138370.1	9e-74	(Brassica oleracea)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM2892	24	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13600.1	7e-49	basic leucine-zipper 58