PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA53G01387
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 226aa    MW: 24307.3 Da    PI: 4.621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA53G01387genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-1666115155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  AA53G01387  66 PVYRGIR-CR-SGKWVSEIREPKK---TTRIWLGTYATPEMAAAAYDVAAIALKG 115
                 68****9.55.6*********854...5**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-966115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2667125IPR001471AP2/ERF domain
SMARTSM003801.5E-2867129IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-1867125IPR016177DNA-binding domain
PROSITE profilePS5103219.2367123IPR001471AP2/ERF domain
PRINTSPR003671.9E-66879IPR001471AP2/ERF domain
CDDcd000181.77E-1668125No hitNo description
PRINTSPR003671.9E-6105125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MADSNNNNNP PVDAITQTST TLPPRTCEDT TLSVSLTCQI PSPVDTPTST TVSSTAVANS  60
RRKKHPVYRG IRCRSGKWVS EIREPKKTTR IWLGTYATPE MAAAAYDVAA IALKGGEALL  120
NFPESVGSYP VPVSTSAVHI RIAAAAAAAA TVVKKKEKEE DVTSRQCDDV AGSSTMMEFI  180
DEEELLNMPK LLEDMAKGMM VDPPWLGSPP SDDSPENSDG ESLWSY
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00138DAPTransfer from AT1G12630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA53G01387
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018454835.14e-82PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9CAN91e-72ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A087HEJ51e-80A0A087HEJ5_ARAAL; Uncharacterized protein
STRINGA0A087HEJ52e-81(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19572777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.12e-41ERF family protein