PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA54G00055
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 161aa    MW: 17777.5 Da    PI: 4.0848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA54G00055genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.6e-142441055
         AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  AA54G00055  2 RSWGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 44
                57**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.56E-13152No hitNo description
SMARTSM003801.4E-25158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-25153IPR001471AP2/ERF domain
PROSITE profilePS5103218.545152IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-16252IPR016177DNA-binding domain
PfamPF008473.1E-8244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009861Biological Processjasmonic acid and ethylene-dependent systemic resistance
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045088Biological Processregulation of innate immune response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900030Biological Processregulation of pectin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CLKGSSANLN FPQISSTLNI  60
QSNSNMCPKS IQRVAAAAAA NTTLLLPSSS SHDSSSSDQE VSNFSESSSW YNCFDELEYS  120
SQDYVVSEEQ FMFINGVSEG FVTPVTDDFF EEGDIRLWSF C
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00185DAPTransfer from AT1G44830Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA54G00055
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010461454.11e-50PREDICTED: ethylene-responsive transcription factor ERF014-like
SwissprotQ9LPE89e-47ERF14_ARATH; Ethylene-responsive transcription factor ERF014
TrEMBLR0I4A51e-48R0I4A5_9BRAS; Uncharacterized protein
STRINGXP_010461454.15e-50(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144091822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.12e-40ERF family protein
Publications ? help Back to Top
  1. Zhang H,Hong Y,Huang L,Li D,Song F
    Arabidopsis AtERF014 acts as a dual regulator that differentially modulates immunity against Pseudomonas syringae pv. tomato and Botrytis cinerea.
    Sci Rep, 2016. 6: p. 30251
    [PMID:27445230]