PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AA57G00162

Organism

Aethionema arabicum

Taxonomic ID

228871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema

Family

BES1

Protein Properties

Length: 291aa MW: 31609.2 Da PI: 8.0009

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AA57G00162	genome	VEGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	213	7.4e-66	2	143	1	146
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+vedDGttyrkg+kpl++ e +g s+sasp+ss+q AA57G00162 2 TSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRVHGNYKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPLDRIELMGGSTSASPCSSYQ---- 96 5899*****************************************************************************************.... PP DUF822 100 ssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslv 146 +sp++sy++sp+sssfpsp + s++++ +sl+p+l++ls+ AA57G00162 97 ----PSPRASYNPSPSSSSFPSPRGSHYPSTTNPfgdaNSLIPWLKNLSSN 143 ....99999999999999999998877777776677779*****99863 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.1E-64	3	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MTSGTRTPTW KERENNKRRE RRRRAIAAKI FAGLRVHGNY KLPKHCDNNE VLKALCNEAG 60 WTVEDDGTTY RKGCKPLDRI ELMGGSTSAS PCSSYQPSPR ASYNPSPSSS SFPSPRGSHY 120 PSTTNPFGDA NSLIPWLKNL SSNSPSKLPF FHGNSISAPV TPPIARSPTH EQITIPDSGW 180 LSGMQTPQSG PSSPTFSLVS RNPFFDKEGF KIGECSPMWT PGQSGNCSPV IPAGIEESSD 240 VPMGDEMAAE FAFGCNANAA FGIVKPWEGE RIHEGCVSDD LELTLGNSRT R

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00444	DAP	Transfer from AT4G18890	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	AA57G00162

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010434483.1	1e-162	PREDICTED: BES1/BZR1 homolog protein 3 isoform X1
Refseq	XP_010439796.1	1e-162	PREDICTED: BES1/BZR1 homolog protein 3
Refseq	XP_010449452.1	1e-162	PREDICTED: BES1/BZR1 homolog protein 3
Swissprot	O49404	1e-162	BEH3_ARATH; BES1/BZR1 homolog protein 3
TrEMBL	A0A1J3FNA3	1e-160	A0A1J3FNA3_NOCCA; BES1/BZR1-like protein 3
STRING	XP_010434483.1	1e-161	(Camelina sativa)
STRING	XP_010439796.1	1e-161	(Camelina sativa)
STRING	XP_010449452.1	1e-161	(Camelina sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1917	27	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	1e-134	BES1/BZR1 homolog 3