PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA5G00193
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 185aa    MW: 21793.4 Da    PI: 7.4357
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA5G00193genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.51.2e-1273107438
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                 kr rr+ +NRe+ArrsR RKk++ieeL++ v++L
  AA5G00193  73 EKRIRRMVSNRESARRSRMRKKMQIEELQQQVEQL 107
                59*******************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-1270134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.90972135IPR004827Basic-leucine zipper domain
PfamPF001701.0E-1074132IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-1274130No hitNo description
SuperFamilySSF579593.69E-1174129No hitNo description
CDDcd147021.25E-1575126No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MESNNVHRSH CFDLFEGNNL SQTEHFTSIF LPNPDFNLSP NISTLSNNNH SHNSNPNGPN  60
NNIYHHEFNL TDEKRIRRMV SNRESARRSR MRKKMQIEEL QQQVEQLMMM HQYLSQKVIS  120
LLENNHQILQ ENLQLKEKVS SFHIIMADML SPIKNIENIN DRNVNHIQEE SSNRTNTPFF  180
NVLGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA5G00193
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_200891.17e-67basic leucine-zipper 70
RefseqXP_020877227.17e-67LOW QUALITY PROTEIN: basic leucine zipper 43
RefseqXP_020889024.14e-67basic leucine zipper 43
TrEMBLD7MUE44e-66D7MUE4_ARALL; BZIP transcription factor family protein
STRINGfgenesh2_kg.8__2046__AT5G60830.17e-67(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-53basic leucine-zipper 70