PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA60G00147
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 189aa    MW: 20286.6 Da    PI: 4.3676
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA60G00147genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-181363255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++k++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a  +l+g
  AA60G00147 13 LYRGVRQRKNSGKWVSEIREPK----KpNRIWLGTFSTPEMAAIAYDVASIALKG 63
                69******************94....468*******************9988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-111263IPR001471AP2/ERF domain
CDDcd000181.30E-291273No hitNo description
SMARTSM003803.8E-321377IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-191373IPR016177DNA-binding domain
PROSITE profilePS5103221.2321371IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-271373IPR001471AP2/ERF domain
PRINTSPR003673.9E-51425IPR001471AP2/ERF domain
PRINTSPR003673.9E-53753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEESRNNGGR HPLYRGVRQR KNSGKWVSEI REPKKPNRIW LGTFSTPEMA AIAYDVASIA  60
LKGTQTDLNF PNSASSLPVP LSTSASDIQA AAASAAAAFG AANDAIVRVK EGETSSGVVK  120
DVVEECGDVM SNDGFVDEDL IFDMPNVIMN MAEGMMLSPP RFNGGNVFGG DEGFEGFNGG  180
NDDYLWKFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-13572673Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA60G00147
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009141595.11e-74PREDICTED: ethylene-responsive transcription factor ERF024-like
RefseqXP_013691481.11e-74ethylene-responsive transcription factor ERF024
SwissprotQ9SJR04e-71ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A078JYM03e-73A0A078JYM0_BRANA; BnaAnng34830D protein
TrEMBLA0A397ZWF93e-73A0A397ZWF9_BRACM; Uncharacterized protein
TrEMBLM4DL543e-73M4DL54_BRARP; Uncharacterized protein
STRINGBra017235.1-P5e-74(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM64242546
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-64ERF family protein