PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA69G00005
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family ERF
Protein Properties Length: 243aa    MW: 28106.1 Da    PI: 8.3799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA69G00005genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.89.4e-12131172351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++ k + +W A I++      +++++lg+f + eeAa+++++a+ 
  AA69G00005 131 MRGVYY-K-NMKWQAAIKVD-----KRQIHLGTFSSQEEAARLYDRAAY 172
                 79**96.5.7*********4.....5********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.598119185IPR001471AP2/ERF domain
PfamPF008471.5E-6130173IPR001471AP2/ERF domain
SMARTSM003801.8E-6130187IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-9131175IPR016177DNA-binding domain
CDDcd000181.50E-11132183No hitNo description
Gene3DG3DSA:3.30.730.101.8E-8132177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MFPTVPSIGP SLRAYFKVYD QCTSPSCLKD LTMDHTYHPE ILTRPNGYVT PLPFLTVEEM  60
ITGIPNQNLD PTETFKQPKE EKTEPITVIS LVDSGSISVK SEQNFSVSEQ PLKRRKQHRR  120
KAVQDQEACL MRGVYYKNMK WQAAIKVDKR QIHLGTFSSQ EEAARLYDRA AYMCGREPNF  180
ELSEEEKREL RGQSWDEFLA CTRRTISNKK SKRIIQEEDC SRVKKEMNLN GLCCGVEEKS  240
QRL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA69G00005
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010450269.12e-81PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
SwissprotQ56XP94e-67ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A1J3HU892e-74A0A1J3HU89_NOCCA; Ethylene-responsive transcription factor-like protein
STRINGXP_010450269.16e-81(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61892646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-69ERF family protein