PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA74G00015
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family WRKY
Protein Properties Length: 206aa    MW: 23662.5 Da    PI: 6.7184
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA74G00015genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.75.4e-2488149159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDg+ WrKYGqK++kgs + r+Y+rC++a   +C++kk+v++ +e+p v  ++Y+geH ++
  AA74G00015  88 LDDGFVWRKYGQKTIKGSLHQRNYFRCAYAkdqNCKAKKQVQQIQENPPVYRTIYNGEHLCQ 149
                 59***************************98999*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-2580151IPR003657WRKY domain
PROSITE profilePS5081121.12683151IPR003657WRKY domain
SuperFamilySSF1182903.53E-2486151IPR003657WRKY domain
SMARTSM007744.8E-3588150IPR003657WRKY domain
PfamPF031063.1E-2489149IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MEKEAMAAIL RGQGSLNTLK MLTSRSDPTV DTHLDNILHS YSQILSFLFR SHKSKSTDKQ  60
SLNRKSSGDE GEEEESVYRV VDSPNLILDD GFVWRKYGQK TIKGSLHQRN YFRCAYAKDQ  120
NCKAKKQVQQ IQENPPVYRT IYNGEHLCQT PIFMYSTDND THNSTKVFQF DNPDQAITHS  180
KLPLVVPVDP VETVDHTRDD DLMISY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-1788149869OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA74G00015
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56091847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.12e-40WRKY DNA-binding protein 67