PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA74G00017
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family WRKY
Protein Properties Length: 211aa    MW: 23868.6 Da    PI: 6.5082
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA74G00017genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.91.1e-1990150259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 d g+ WrKYGqK++kgs + r+Y+rC +a   + ++kk+v++ +++p++  ++Y+g H ++
  AA74G00017  90 DGGFLWRKYGQKTIKGSLYQRNYFRCGYAkhqNWEAKKQVQQIQDNPSFYRTVYNGPHFCQ 150
                 5689**********************998777999***********************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-2083150IPR003657WRKY domain
PROSITE profilePS5081117.07584147IPR003657WRKY domain
SuperFamilySSF1182901.44E-1986150IPR003657WRKY domain
SMARTSM007748.2E-2689151IPR003657WRKY domain
PfamPF031066.8E-1992150IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MDSEAMTAIT RGQESVNALK MIITNGLDPT VAVHLDTILH SFSLLQLLLH SPKSKSTAKQ  60
SLNKKSFGSE RAEDESSAYH TVDSPTPILD GGFLWRKYGQ KTIKGSLYQR NYFRCGYAKH  120
QNWEAKKQVQ QIQDNPSFYR TVYNGPHFCQ SSVFLHSTDN DTHSSTKVFR FDNTDQVITH  180
SELPLLVPVD SVEAVDHTRG DDFDDFLLNP E
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA74G00017
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56091847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.14e-37WRKY DNA-binding protein 64