PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA74G00019
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family WRKY
Protein Properties Length: 112aa    MW: 13046.5 Da    PI: 4.3129
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA74G00019genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.41e-113432259
                EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                 sYYrC  a   +C +kk+v++ +++p+++ ++Y g+H ++
  AA74G00019  3 LSYYRCLNAkhqKCDAKKQVQKIQDNPSLFRTIYIGQHVCQ 43
                59****765566**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508119.592145IPR003657WRKY domain
PfamPF031066.2E-11343IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-10443IPR003657WRKY domain
SMARTSM007747.1E-7444IPR003657WRKY domain
SuperFamilySSF1182904.18E-10443IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MQLSYYRCLN AKHQKCDAKK QVQKIQDNPS LFRTIYIGQH VCQASIILYT NNNDNIHNST  60
IQFENQDQTM TDSNLPLLVS VETDNYVVDD DLDLSLINHE EFWLTNGDTM DF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA74G00019
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56091847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66560.19e-19WRKY DNA-binding protein 64