PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA93G00015
Organism
Aethionema arabicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 289aa    MW: 32051.2 Da    PI: 8.4432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA93G00015genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.73.8e-16219267554
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+ +l+e +k
  AA93G00015 219 RRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLR-RLKEAEK 267
                 79*************************************999.6666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-13210261No hitNo description
SMARTSM003382.1E-10215271IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.22217261IPR004827Basic-leucine zipper domain
CDDcd147073.00E-24219264No hitNo description
SuperFamilySSF579598.13E-10219261No hitNo description
PfamPF001701.2E-12219261IPR004827Basic-leucine zipper domain
PROSITE patternPS000360222237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MGSNMGSIEE PISQSLTRQG SLYSLTLHEV QNHLGSSGKP LGSMNLDELL KSVWSSQPPV  60
NGTATEPAPE GLSRQGSLTL PRDLSKKTVD EVWRDIQQDK NSYNTHETRE KQPTLGEITL  120
EDLLLKAGVV TETIPVSVTG GCSNSAGLGP GLGQNIPQNG PWVQYHQLPS MPQAQAFMAY  180
PISEIQEMVS PILGGLSDTQ TPGRKRVASE EIVEKTVERR QKRMIKNRES AARSRARKQA  240
YTHELEIKVS RLEEENERLR RLKEAEKILP STPPPDPKWQ LRRTSSAPF
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAA93G00015
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006402943.11e-151ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-147AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLV4NE971e-149V4NE97_EUTSA; Uncharacterized protein
STRINGXP_006402943.11e-150(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-135ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]