PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC194362.3_FGP003
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 216aa    MW: 23925.7 Da    PI: 10.6946
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC194362.3_FGP003genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.95.4e-10117136322
                        -SS-EEEEEEE--TT-SS-E CS
               WRKY   3 DgynWrKYGqKevkgsefpr 22 
                        Dgy+WrKYGqK+++g+ +pr
  AC194362.3_FGP003 117 DGYRWRKYGQKQIEGAMYPR 136
                        9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-9100137IPR003657WRKY domain
PROSITE profilePS5081110.338110136IPR003657WRKY domain
SuperFamilySSF1182902.35E-7111137IPR003657WRKY domain
SMARTSM007741.3E-4115164IPR003657WRKY domain
PfamPF031065.9E-7117136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MAALAGRGEE LLEQLRALLF LPAASSATPA ANKVESAAVG PGGGAVAAPS SCGRRRRRQG  60
QEGGKRDRDD DGVRDGEHAA DDDGARPQHP PPPRCCKRRK KKKQESKSTV TSVLDFDGYR  120
WRKYGQKQIE GAMYPRLRSH ASRAEKPREV ESRTLLLDEE ACEKNEVEAE VRENMAGDRG  180
GGGWLQRGSG RGQPHTWRSE ARCSGGRKRR RWWKGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196102KRRKKKK
297102RRKKKK
3206210RKRRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC194362.3_FG003
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC194362.3_FGP003
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008675627.13e-91uncharacterized protein LOC103651699
TrEMBLA0A1D6NQP56e-90A0A1D6NQP5_MAIZE; Putative WRKY transcription factor 38
STRINGAC194362.3_FGP0031e-153(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.23e-08WRKY DNA-binding protein 43