PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC199571.3_FGP004
Common NameZEAMMB73_732401
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB_related
Protein Properties Length: 255aa    MW: 27235.3 Da    PI: 7.6926
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC199571.3_FGP004genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.51.3e-07149180132
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg 32 
                        +g W+ eEd++l d++ ++G g+W++ + + g
  AC199571.3_FGP004 149 KGLWSLEEDQKLRDYILLHGHGCWSALPMKAG 180
                        678**********************9998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.47E-6144178IPR009057Homeodomain-like
PROSITE profilePS500906.26144175IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.604.1E-9148180IPR009057Homeodomain-like
CDDcd001672.82E-4152181No hitNo description
PROSITE profilePS513528.987174255IPR013766Thioredoxin domain
SuperFamilySSF528333.21E-18189253IPR012336Thioredoxin-like fold
Gene3DG3DSA:3.40.30.106.9E-19190253IPR012336Thioredoxin-like fold
PfamPF000856.4E-16192253IPR013766Thioredoxin domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045454Biological Processcell redox homeostasis
GO:0005623Cellular Componentcell
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006354anatomyear floret
PO:0009001anatomyfruit
PO:0009054anatomyinflorescence bract
PO:0009074anatomystyle
PO:0009089anatomyendosperm
PO:0020136anatomyear inflorescence
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MGASAPTAAL SSAPPLPLSL SVANGQEEEE GSAGPPLVAM ASQCAPPLPP RPRAAAPFLL  60
GHTPPHARPP RCAALTPSVR AAARPCFLAS TRVLLRPQSE EAPASCSWSA SDPLLCASPA  120
SALLVAWRRR HSPAMGCKAC DKPKPNYRKG LWSLEEDQKL RDYILLHGHG CWSALPMKAG  180
TNVKIAAIPS SVVVLTSETF DSIVLDEFYA PWCGHCKHLA PIYEKLASVF KQDDSVVIAN  240
LDADKHTDLD EKYAF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1625250.0meristem| root| shoot| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC199571.3_FG004
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC199571.3_FGP004
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0350550.0BT035055.1 Zea mays full-length cDNA clone ZM_BFb0035A08 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008662985.10.0protein disulfide isomerase-like 2-1
TrEMBLA0A3L6E3A31e-176A0A3L6E3A3_MAIZE; Protein disulfide isomerase-like 2-1
STRINGAC199571.3_FGP0040.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.12e-11myb domain protein 45