PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC205484.3_FGP005
Common NameZEAMMB73_146151
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family NAC
Protein Properties Length: 241aa    MW: 27460.5 Da    PI: 9.2568
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC205484.3_FGP005genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.11.6e-1045257105
                NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
                        ewyf++ rd+ky+    +nrat+ gyWk tgkd ev+s ++ ++  ++t
  AC205484.3_FGP005   4 EWYFYCLRDRKYPVVLCTNRATAVGYWKITGKDCEVHSGRSGATAEQRT 52 
                        8************************************976555555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.043197IPR003441NAC domain
SuperFamilySSF1019411.83E-9343IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MGVEWYFYCL RDRKYPVVLC TNRATAVGYW KITGKDCEVH SGRSGATAEQ RTIRSILDRG  60
KTTTTLGKVN NDNLSRLLTE YIGMDNMLAL VCKTYDGVKG LDKYDKDDII DKTSGVHGLG  120
RAVGKFLYGR ITVFCLENLS KNLKVKFVVT TDVSSLPENV VEMEEQVKRK NWQKEMVLED  180
MKREEDLLKQ VKELYRKQKQ ELMDYVTQPA VTQTSRDSPA THSPATPGSN PFGAKLSNKW  240
W
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.830471e-149aerial organ| meristem| pollen| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC205484.3_FG005
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC205484.3_FGP005
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0361361e-147BT036136.1 Zea mays full-length cDNA clone ZM_BFb0097J05 mRNA, complete cds.
GenBankBT0835391e-147BT083539.1 Zea mays full-length cDNA clone ZM_BFb0009E06 mRNA, complete cds.
GenBankEU9670581e-147EU967058.1 Zea mays clone 299201 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001132336.11e-61uncharacterized protein LOC100193778
TrEMBLA0A1D6Q3P31e-130A0A1D6Q3P3_MAIZE; Putative NAC domain transcription factor superfamily protein
STRINGAC205484.3_FGP0051e-180(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.15e-15NAC domain containing protein 100