PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_001951-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family BES1
Protein Properties Length: 330aa    MW: 35225.4 Da    PI: 8.4568
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_001951-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.53.6e-6421472149
           DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                      +++r+ptw+ErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkAL+reAGw+ve+DGttyrkg+kp e ++++g sas+sp+ss+ 
  AHYPO_001951-RA   2 TGTRMPTWRERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALAREAGWIVEEDGTTYRKGCKPVEPMDIIGGSASVSPCSSYP 95 
                      689******************************************************************************************* PP

           DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsss 149
                              +   +sy++sp+sssfpsp+++ ++++ +     +sl+p+l++ls++ ss
  AHYPO_001951-RA  96 ------VSPRAGASYNPSPASSSFPSPARSYCVPNVNGttdpNSLIPWLKNLSSSGSS 147
                      ......44566789****************999887667788*********9985443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.2E-643142IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MTGTRMPTWR ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALAREAGW  60
IVEEDGTTYR KGCKPVEPMD IIGGSASVSP CSSYPVSPRA GASYNPSPAS SSFPSPARSY  120
CVPNVNGTTD PNSLIPWLKN LSSSGSSSTS SKLPYIYIPG GSISAPVTPP LSSPTCRTPR  180
TKNDWDDSNV VPPWANPANY SLPSSTPQSP GRQPLPEPGW LANIQIPQGA PTSPTFSLVS  240
SNPFASKDEV MAGSGSRMWT PGQSGTCSPI VATGSDRTAD VPMSDGIAAE FAFGNGMTGG  300
LVKAWEGEII HEECVPDDLE LTLGSSRTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-24586372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-24586372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-24586372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-24586372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010665681.10.0PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-114BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0J8B9H30.0A0A0J8B9H3_BETVU; Uncharacterized protein
STRINGXP_010665681.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.16e-96BES1/BZR1 homolog 4