PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_003342-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bZIP
Protein Properties Length: 250aa    MW: 28054.2 Da    PI: 4.4616
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_003342-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_119.91.6e-0631702564
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
           bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64
                     + +i+eL +++++Le+e ++L  ++ el+ e+++lk+e++
  AHYPO_003342-RA 31 QTSIDELNQRIETLENEKSQLETKVGELNSEIESLKTENK 70
                     5689*********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-43367No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MAETEALSNG INGDSSEFYD DDHSTKKSTS QTSIDELNQR IETLENEKSQ LETKVGELNS  60
EIESLKTENK SAESDRKAAE TIAKRAAELE GQIVRLEHDY FSVMNELEEG NRENHELKAK  120
IKELEENAKR EKEERESEIN LLKKEKKQVE DSVGELQELL KVSEEKVKKM EAKMDELMNK  180
SEESEKLIAG LMEKVVEREA SFEDAVEKSS DEVEGFNGLK KQLPVIGAVS AGVLISAAMA  240
ACYIRHNKN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021857910.11e-86peroxisomal and mitochondrial division factor 2
TrEMBLA0A0K9QKD43e-85A0A0K9QKD4_SPIOL; Uncharacterized protein
STRINGXP_010694654.11e-75(Beta vulgaris)