PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_006289-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bZIP
Protein Properties Length: 216aa    MW: 23880.8 Da    PI: 8.1934
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_006289-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.77.9e-16143188348
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                       +kr +rk+kNRe+A rsR+RK+a+  eL  +v  Le+ N+++kke
  AHYPO_006289-RA 143 TDKRMKRKIKNRESAARSRARKQAYHNELVSEVSLLEERNMRYKKE 188
                      69******************************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8141200IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.921143188IPR004827Basic-leucine zipper domain
PfamPF001703.7E-13143189IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-12143188No hitNo description
SuperFamilySSF579593.44E-10145190No hitNo description
CDDcd147074.09E-14145199No hitNo description
PROSITE patternPS000360148163IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MSMNLDEFLK NAWSPEINQT TSIEENNNGS STKLLQSLGS LPFSRTSSEK IVDEMWRELK  60
QGEKIKTSKE VKREPMTLES FLTKAGAIDE SSLGGPVMSM DVAPTSQAFS QPTGSGLGLD  120
LGLSPDPTIG ASCDRLNSVG GSTDKRMKRK IKNRESAARS RARKQAYHNE LVSEVSLLEE  180
RNMRYKKEKE FDSICAAVSS DEPRYQLRRT SSSDF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689370.15e-82PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X4
TrEMBLA0A0J8BLW31e-80A0A0J8BLW3_BETVU; Uncharacterized protein
STRINGXP_010689366.14e-71(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-30ABA-responsive element binding protein 3