PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_007715-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family EIL
Protein Properties Length: 385aa    MW: 44939.9 Da    PI: 4.9809
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_007715-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3138.87.9e-43311421107
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 
                      e+lkkrmwkd ml+k+ ke   ++ +  +++      ++++++ +ne++rrkk  raQD+iLkYM+k+mevcna+GfvYgiipekgkp++g+sd
  AHYPO_007715-RA  31 EDLKKRMWKDHMLMKKFKESATKKKNVTSNSrgdtsDNTESESSRNEKSRRKKLLRAQDAILKYMVKMMEVCNAKGFVYGIIPEKGKPMTGSSD 124
                      89***************9987665554444433443233334499************************************************* PP

                      XXXXXXXXXXXXXXXXXX CS
             EIN3  90 sLraWWkekvefdrngpa 107
                      sLr+WWke v+f++n+p 
  AHYPO_007715-RA 125 SLREWWKETVKFEQNAPE 142
                      **************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.3E-4431142No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MVEIYDELMD DSLSTEELTL DHQGKEKISY EDLKKRMWKD HMLMKKFKES ATKKKNVTSN  60
SRGDTSDNTE SESSRNEKSR RKKLLRAQDA ILKYMVKMME VCNAKGFVYG IIPEKGKPMT  120
GSSDSLREWW KETVKFEQNA PENDTALWSK IIGKEETLVG TNNDGDDNDG DRISSNESLI  180
IQSDMHGSVN VHGRAFSSNE SRRIQFDMHD RVQVHNRENM CNRAKVCDLV GEVRKELELV  240
NNKDVTMVTN EEYQETYSQR RIIQSDMHDR VDVHDRANMS NRAEGRGRTG EVRTTLELVN  300
NKDVIMATNE EYQENYSQRQ VYEKIHYWEN SFAHMNLDTH YHLHNMDLNK CPIQELEEDM  360
HKENEFVVGT SIWDLLYQEP DDDD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.12e-34EIL family protein