PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_008141-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family G2-like
Protein Properties Length: 64aa    MW: 6845.75 Da    PI: 7.7849
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_008141-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.82.3e-133559125
          G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                     kprlrWtp LHerFv+av++LGG++
  AHYPO_008141-RA 35 KPRLRWTPHLHERFVDAVTKLGGPD 59
                     79*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-113259IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-83559IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
MERSGMGGVY GGGDGGAFSY HQALEGGVLM SRDPKPRLRW TPHLHERFVD AVTKLGGPDT  60
LYL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021725593.13e-20myb family transcription factor PHL11-like
RefseqXP_021767850.13e-20myb family transcription factor PHL11-like
TrEMBLM5WAB68e-16M5WAB6_PRUPE; Uncharacterized protein
STRINGXP_010677471.13e-17(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.12e-14G2-like family protein