 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
AHYPO_008164-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
|
| Family |
bZIP |
| Protein Properties |
Length: 349aa MW: 36599.5 Da PI: 5.185 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_008164-RA | genome | BYU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 27.5 | 6.7e-09 | 274 | 312 | 25 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+ae++eL++++++L++eN L++el+++++ +++l +e+
AHYPO_008164-RA 274 QAECDELAQRAEALKEENANLRSELSRMRNDYEQLLAEN 312
89*********************************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MGSSETDKPA EDPKVPVAIS TQEQSPAVNT ATVNADWTGF QAYSPIPPHG FLASSPQAHP 60
YMWGVQPMMP PYGTPPHPYV AMYPHGGIYA HPSIPPGSYP FSPFAIPPPN GVAEASVTTT 120
ANADGDGKHP DGKEKLPIKR SKGSLGSLNM ITGKNNEEGK QTGPSANGTC SKSVESASDG 180
SSEGSHSNSQ NNGVLNAPHA MVNHAMTMLP MTASGAPAAV PGPATNLNIG MDYWGTPASS 240
AIPAMRGKVP SGPVATGIVP AGSRDNLQSQ LWLQAECDEL AQRAEALKEE NANLRSELSR 300
MRNDYEQLLA ENTALKERLG DIPEDEGSKR GENHTGSETQ ENRKTDQA*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 4e-92 | basic region/leucine zipper transcription factor 16 |
