PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AHYPO_009286-RA

Organism

Amaranthus hypochondriacus

Taxonomic ID

28502

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus

Family

bZIP

Protein Properties

Length: 313aa MW: 33712.8 Da PI: 7.8984

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AHYPO_009286-RA	genome	BYU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.9	4.3e-08	266	291	5	30
CHHHCHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeiee 30 +r++r++kNRe+A rsR+RK++ + AHYPO_009286-RA 266 RRQKRMIKNRESAARSRARKQEVEKA 291 79*******************96665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.7E-7	258	291	No hit	No description
CDD	cd14707	1.55E-12	266	287	No hit	No description
SuperFamily	SSF57959	1.02E-5	266	292	No hit	No description
PROSITE pattern	PS00036	0	269	284	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MGTQTMGSQG GVGDSSVIKI PSLSRQGSLY SLTLDEVQNQ LGNLGKPLSS MNLDELLRSV 60 GTVEAGGSSD VGNGVEKLNQ GAPGPLLNRQ SSFNLSQDLS KKTVDEVWRE IQQVKKSSQE 120 ENPERQNTLG EMTLEEFLNQ AGIVVDAVGV SGNGNGNGND SNTGETNMGS IDPNPGRHSN 180 VPQHSQWMPY QVLPQQQQHS MMTMFMPGHH VPQPLAMSGG ALSDAAFNDA QLAVSTTPLM 240 GTMSDMQAIG RKRLAPGDVV EKTVERRQKR MIKNRESAAR SRARKQEVEK ALPSVPPPQP 300 KFQLRRTNSA PF*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010673247.1	1e-166	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_019103829.1	1e-166	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	3e-74	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0K9R5G7	1e-145	A0A0K9R5G7_SPIOL; Uncharacterized protein
STRING	XP_010673247.1	1e-166	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	4e-72	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	AHYPO_009286-RA

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]