PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AHYPO_013737-RA

Organism

Amaranthus hypochondriacus

Taxonomic ID

28502

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus

Family

VOZ

Protein Properties

Length: 515aa MW: 57721.5 Da PI: 6.2071

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AHYPO_013737-RA	genome	BYU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	386.9	5.2e-119	275	492	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 ppp+aflgpkcalwdc+rpaqgse +++ycs +ha+la++e +pgt+p+lrp+gi+lkdg++faal++k +gk+vgipec gaat+kspwn++e AHYPO_013737-RA 275 PPPAAFLGPKCALWDCARPAQGSEYCKNYCSGYHADLAMKECPPGTSPILRPGGIGLKDGPIFAALKSKLEGKNVGIPECIGAATSKSPWNTPE 368 89****************************************************************************************** PP VOZ 95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelk 188 lf++s+lege +rewlffdkprrafe+gnrkqrslpd++grgwhesrkq+mke+gg+krsyy dpqp + +ewhl+eye+++++ +alyrlelk AHYPO_013737-RA 369 LFNISILEGEKVREWLFFDKPRRAFETGNRKQRSLPDHEGRGWHESRKQIMKEYGGQKRSYYADPQPHKDLEWHLFEYEMDSCNVCALYRLELK 462 ****************************************************************************************** PP VOZ 189 lvde.kksakgkvskdsladlqkklgrlta 217 ++de k+s+k+k ++d+l dlqk++grlta AHYPO_013737-RA 463 VADErKRSPKTKGTTDPLLDLQKRMGRLTA 492 9735699*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence Send to blast
MGKDSKSCKQ PSHQLLKCQA KNRVEDIQSM LNELQVARKE SRTGDAATLE EQVNQILNEW 60 KAELNEPTPA SSLLEDSFGS FSKELGQLLQ QFEVEDDATS PLTAPSSARN GDSVHAPALS 120 GSLRDEEIRY LNHVTQQQSS QGYTPQQHEF IGPELHVSQR HGFPVFDSHI SQQKFPGFGN 180 HGIQNHILQP QDYQGLEDCN GAVNSMQGRL INNFEASGLH NMLPNNFEMT TQLDFLHLDK 240 HENLDSEVFI NASGIEHWGL DDISDFSNMF PNVNPPPAAF LGPKCALWDC ARPAQGSEYC 300 KNYCSGYHAD LAMKECPPGT SPILRPGGIG LKDGPIFAAL KSKLEGKNVG IPECIGAATS 360 KSPWNTPELF NISILEGEKV REWLFFDKPR RAFETGNRKQ RSLPDHEGRG WHESRKQIMK 420 EYGGQKRSYY ADPQPHKDLE WHLFEYEMDS CNVCALYRLE LKVADERKRS PKTKGTTDPL 480 LDLQKRMGRL TAEVSAENKR SGKGKAKFDE KSDH*

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence Send to blast

MGKDSKSCKQ PSHQLLKCQA KNRVEDIQSM LNELQVARKE SRTGDAATLE EQVNQILNEW  60
KAELNEPTPA SSLLEDSFGS FSKELGQLLQ QFEVEDDATS PLTAPSSARN GDSVHAPALS  120
GSLRDEEIRY LNHVTQQQSS QGYTPQQHEF IGPELHVSQR HGFPVFDSHI SQQKFPGFGN  180
HGIQNHILQP QDYQGLEDCN GAVNSMQGRL INNFEASGLH NMLPNNFEMT TQLDFLHLDK  240
HENLDSEVFI NASGIEHWGL DDISDFSNMF PNVNPPPAAF LGPKCALWDC ARPAQGSEYC  300
KNYCSGYHAD LAMKECPPGT SPILRPGGIG LKDGPIFAAL KSKLEGKNVG IPECIGAATS  360
KSPWNTPELF NISILEGEKV REWLFFDKPR RAFETGNRKQ RSLPDHEGRG WHESRKQIMK  420
EYGGQKRSYY ADPQPHKDLE WHLFEYEMDS CNVCALYRLE LKVADERKRS PKTKGTTDPL  480
LDLQKRMGRL TAEVSAENKR SGKGKAKFDE KSDH*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010689762.1	0.0	PREDICTED: transcription factor VOZ1
TrEMBL	A0A0K9S044	0.0	A0A0K9S044_SPIOL; Uncharacterized protein
STRING	XP_010689762.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42400.1	1e-124	vascular plant one zinc finger protein 2

Link Out ? help Back to Top
Phytozome	AHYPO_013737-RA