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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AHYPO_014277-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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| Family |
C2H2 |
| Protein Properties |
Length: 291aa MW: 31521.1 Da PI: 4.2801 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_014277-RA | genome | BYU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.6 | 0.0004 | 265 | 287 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+ksF++ L++H + H
AHYPO_014277-RA 265 SCGSCKKSFNSDIALQSHNKAkH 287
6*****************88766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MANMQFWGVD VKAKEAAKVT VDEGQIIHLS QATLSELKKD NEPVLIHVKV GDQKLVLGML 60
NQNTPQLSFD LVFDQDFEIS HNWKNGSIHL LGYQTEMDDG DADMFPDSSD DEEEVPVLQK 120
ENGKPAEASK PKAVAKPAKD DKPKPEEKDD SDDDDSDDDE DEDDSDDEDD SDEDMMGKID 180
DSDEDDDEDD SEEESEDEKP AKAASGKKRP NAEAKTPEAK KAKIATPQKT DGKKNAHTAT 240
PHPSKKGGKS PGGDKATPKS GGQVSCGSCK KSFNSDIALQ SHNKAKHGGK *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
