PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_014826-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family EIL
Protein Properties Length: 379aa    MW: 42352.7 Da    PI: 4.4052
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_014826-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3148.59e-46321492111
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.......XXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa......tgakksn.......ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgk 82 
                      +lkkrmwkdqm++k+ k ++    +++eaa      +     +       + +e++rrkkm r+QD+iLkYM+k+mevcnaqGfvYgiipekgk
  AHYPO_014826-RA  32 DLKKRMWKDQMRMKKFKAERHAAQAEAEAAvdesagL-----SsststiaTQEEKSRRKKMLRSQDAILKYMVKIMEVCNAQGFVYGIIPEKGK 120
                      89************99999988777777775555441.....0445667799****************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3  83 pvegasdsLraWWkekvefdrngpaaisk 111
                      pv+g+sdsLr+WWk+ v+fd+n+p a+ +
  AHYPO_014826-RA 121 PVTGSSDSLREWWKDSVKFDLNAPEALQQ 149
                      ************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-4632150No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MVEINEELME ALSAGEMSDG TGSEVEDIGY GDLKKRMWKD QMRMKKFKAE RHAAQAEAEA  60
AVDESAGLSS STSTIATQEE KSRRKKMLRS QDAILKYMVK IMEVCNAQGF VYGIIPEKGK  120
PVTGSSDSLR EWWKDSVKFD LNAPEALQQL IPVIVAAVEK ENPSFLKGDA QADELAIGST  180
KSCHSSIGES SEHLSNKRKA DTFDQEKIDA RGNFGWPQNE TDFYYVPHSN SAEFETAYAH  240
HATDFAGYSY FPHRAASLPN LQMVDLSMEC NDLNLLPWSW NDHVRSSGGG SEVMHDLAGG  300
AEHEMYDQCA PQMYDGVGDQ TQYWGNDAAQ MGFDADFQLH RENIEFHHFW LDEDLNKQAA  360
ATAATSIWDL QYQEPDDE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673484.11e-58PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
STRINGXP_010673484.16e-58(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-38EIL family protein