 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
AHYPO_015644-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
|
| Family |
bZIP |
| Protein Properties |
Length: 369aa MW: 38293.2 Da PI: 4.9607 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_015644-RA | genome | BYU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 27.4 | 7.3e-09 | 295 | 333 | 25 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+ae++eL++++++L++eN+ L++el++++ +++l +e+
AHYPO_015644-RA 295 QAECDELAQRAEALKEENSNLRSELNRIRSDYEQLVAEN 333
89********************************98887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MGSSETDKPA KDPKTPVEIA SHEQSSATST ATATVNADWG GFQAYSPIPP PGFMASSPQA 60
HPYMWGVQPI MPPYGTPPHP YVAMYPHGGI YAHPSIHPGS YPFSPYPMPP ANGMAEASGT 120
TSVNADGDGK HPEGKEKLPI KRSKGSLGSL NMITGKTNEE GKATGSVANG ICSKSAESAS 180
NGSSEGSDAS SQNDSGGKQE AHEADGSQSG NPAHDTQNGV LNVPHTMVNH AMAMVPMTAP 240
GAPVAVPGPA TNLNIGMDYW GTPASSPIPA MRGKAPSAPG IVPTGSRDQS PLWLQAECDE 300
LAQRAEALKE ENSNLRSELN RIRSDYEQLV AENTALKERI GEIPEGIVSS RAELSMAGET 360
QESGKTDN*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 2e-98 | basic region/leucine zipper transcription factor 16 |
