PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_019233-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family BES1
Protein Properties Length: 126aa    MW: 14842.5 Da    PI: 11.2494
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_019233-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822115.39.4e-363199371
           DUF822  3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrk 71
                     s r pt++Er nn  RE+rRR i+ +iy GLR +Gnyklpk+aDnn  lkALc eAGw+v++DGt ++k
  AHYPO_019233-RA 31 SLRFPTERERQNNVEREKRRREISRRIYNGLRLHGNYKLPKHADNNHLLKALCLEAGWIVQEDGTIFKK 99
                     6799***************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.5E-323399IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MKRNKKTRGC IKTSRGPWVV QRSTKKGVVK SLRFPTERER QNNVEREKRR REISRRIYNG  60
LRLHGNYKLP KHADNNHLLK ALCLEAGWIV QEDGTIFKKV LYITTYLLLL LLYFITFVNF  120
PIIIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-165399392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-165399392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-165399392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-165399392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011046810.13e-40PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like
TrEMBLA0A0K9QQR49e-48A0A0K9QQR4_SPIOL; Uncharacterized protein
STRINGXP_010677019.13e-51(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.15e-19BES1/BZR1 homolog 2