PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G64105.1
Common NameANAC027, NAC027
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family NAC
Protein Properties Length: 161aa    MW: 19217.8 Da    PI: 5.8726
Description NAC domain containing protein 27
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G64105.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.21.2e-171113510128
          NAM  10 tdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvgl 102
                  +dee++ +yL++k++g++ ++ + + e+  ++y+vePw Lp++++   +  ew++F kr++ky++    + +  +g W       +vlsk +ge++g 
  AT1G64105.1  11 SDEEIIENYLRPKINGETSSIPRYVVELaeELYTVEPWLLPRQTAPilNPGEWFYFGKRNRKYSN---LEGVHCEGSWILEDGCIAVLSKeTGEEIGG 105
                  79****************8887776555479**********5333333555************86...4445568****8888888888768888999 PP

          NAM 103 kktLvfy...kg.rapkgektdWvmheyrl 128
                   + + +y   kg ++++ + ++W+m eyrl
  AT1G64105.1 106 TTRFRYYyrnKGdKESRLKMSNWFMREYRL 135
                  999999977755356666789*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.5032155IPR003441NAC domain
SuperFamilySSF1019414.05E-2511153IPR003441NAC domain
PfamPF023651.0E-1011135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007275Biological Processmulticellular organism development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MQAEEIICRV SDEEIIENYL RPKINGETSS IPRYVVELAE ELYTVEPWLL PRQTAPILNP  60
GEWFYFGKRN RKYSNLEGVH CEGSWILEDG CIAVLSKETG EEIGGTTRFR YYYRNKGDKE  120
SRLKMSNWFM REYRLYYKSR RVFNGRQVFC IITCNDEHFI E
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.360470.0flower
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible262340_at0.0
Expression AtlasAT1G64105-
AtGenExpressAT1G64105-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G64105.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G64105
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0077640.0AC007764.2 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence.
GenBankAK2208460.0AK220846.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-38-I06.
GenBankBT0255160.0BT025516.1 Arabidopsis thaliana At1g64105 mRNA, complete cds.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001077770.11e-111pentatricopeptide (PPR) repeat-containing protein
RefseqNP_564823.11e-116NAC domain containing protein 27
TrEMBLA0A178WJS81e-115A0A178WJS8_ARATH; NAC027
TrEMBLA8MRJ81e-109A8MRJ8_ARATH; Pentatricopeptide (PPR) repeat-containing protein
TrEMBLQ9SH611e-115Q9SH61_ARATH; At1g64105
STRINGAT1G64100.21e-110(Arabidopsis thaliana)
STRINGAT1G64105.11e-116(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM154271117
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Ooka H, et al.
    Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
    DNA Res., 2003. 10(6): p. 239-47
    [PMID:15029955]
  3. Howell MD, et al.
    Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting.
    Plant Cell, 2007. 19(3): p. 926-42
    [PMID:17400893]
  4. Ascencio-Ib
    Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.
    Plant Physiol., 2008. 148(1): p. 436-54
    [PMID:18650403]
  5. Curran A, et al.
    Calcium-dependent protein kinases from Arabidopsis show substrate specificity differences in an analysis of 103 substrates.
    Front Plant Sci, 2011. 2: p. 36
    [PMID:22645532]