PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G66550.1
Common NameATWRKY67, F28G11.3, WRKY67
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family WRKY
Protein Properties Length: 254aa    MW: 29039.7 Da    PI: 6.8293
Description WRKY DNA-binding protein 67
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G66550.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.32.7e-22108168259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK++k s + r YYrCt+a   +C+++k+v++ +++p v  +tY g+H ++
  AT1G66550.1 108 NDGFTWRKYGQKTIKASAHKRCYYRCTYAkdqNCNATKRVQKIKDNPPVYRTTYLGKHVCK 168
                  7***************************99999*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-2399168IPR003657WRKY domain
SuperFamilySSF1182901.44E-21104168IPR003657WRKY domain
SMARTSM007743.1E-32107169IPR003657WRKY domain
PfamPF031062.9E-22108168IPR003657WRKY domain
PROSITE profilePS5081118.797108165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MVSNIDHKAM EALLRGQGCA NNLKILLENG EISSVSTEPL IHTILDSFSL ALSFMDSPNH  60
PPYHESSSHN MASHMSRRSS KQVQHRRKLC VAEGLVNYNH DSRTMCPNDG FTWRKYGQKT  120
IKASAHKRCY YRCTYAKDQN CNATKRVQKI KDNPPVYRTT YLGKHVCKAF AVHDDTYSST  180
MIRFDQVVPE PIMPQLTTID HQVITVEENS AEHIMNQECD INDYLVDDDP FWASQFPPFP  240
SSDTMFLENI SAFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-16108168969OsWRKY45
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible256364_at0.0
Expression AtlasAT1G66550-
AtGenExpressAT1G66550-
ATTED-IIAT1G66550-
Functional Description ? help Back to Top
Source Description
TAIRmember of WRKY Transcription Factor; Group III
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G66550.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G66550
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4211540.0AF421154.1 Arabidopsis thaliana WRKY transcription factor 67 (WRKY67) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_564877.10.0WRKY DNA-binding protein 67
SwissprotQ93WV70.0WRK67_ARATH; Probable WRKY transcription factor 67
TrEMBLC0SV180.0C0SV18_ARATH; WRKY DNA-binding protein 67 (Fragment)
STRINGAT1G66550.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56091847
Representative plantOGRP1417875
Publications ? help Back to Top
  1. Eulgem T,Rushton PJ,Robatzek S,Somssich IE
    The WRKY superfamily of plant transcription factors.
    Trends Plant Sci., 2000. 5(5): p. 199-206
    [PMID:10785665]
  2. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  3. Hoth S, et al.
    Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana.
    FEBS Lett., 2003. 554(3): p. 373-80
    [PMID:14623097]
  4. Ma S,Gong Q,Bohnert HJ
    Dissecting salt stress pathways.
    J. Exp. Bot., 2006. 57(5): p. 1097-107
    [PMID:16510518]
  5. Truman W,de Zabala MT,Grant M
    Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance.
    Plant J., 2006. 46(1): p. 14-33
    [PMID:16553893]
  6. de Torres-Zabala M, et al.
    Pseudomonas syringae pv. tomato hijacks the Arabidopsis abscisic acid signalling pathway to cause disease.
    EMBO J., 2007. 26(5): p. 1434-43
    [PMID:17304219]