PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT1G71450.1
Common NameERF021, F26A9.17
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 183aa    MW: 20315.6 Da    PI: 5.3178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT1G71450.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-172372255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  y+GVr +k +g+Wv+eIr+p +   + r++lg+f t+e+Aa a++ a+  ++g
  AT1G71450.1 23 AYRGVRKRK-WGKWVSEIREPGT---KNRIWLGSFETPEMAATAYDVAAFHFRG 72
                 69****999.**********833...59*********************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.04E-322282No hitNo description
SuperFamilySSF541711.9E-222281IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.4E-322381IPR001471AP2/ERF domain
SMARTSM003803.9E-382386IPR001471AP2/ERF domain
PfamPF008475.3E-112372IPR001471AP2/ERF domain
PROSITE profilePS5103223.632380IPR001471AP2/ERF domain
PRINTSPR003678.0E-132435IPR001471AP2/ERF domain
PRINTSPR003678.0E-136282IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009005anatomyroot
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MAGLRNSGNS DKAQNDGKGV PSAYRGVRKR KWGKWVSEIR EPGTKNRIWL GSFETPEMAA  60
TAYDVAAFHF RGREARLNFP ELASSLPRPA DSSSDSIRMA VHEATLCRTT EGTESAMQVD  120
SSSSSNVAPT MVRLSPREIQ AINESTLGSP TTMMHSTYDP MEFANDVEMN AWETYQSDFL  180
WDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-172480663ATERF1
3gcc_A6e-172480663ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.668300.0root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1453374130.0
Genevisible259946_at1e-176
Expression AtlasAT1G71450-
AtGenExpressAT1G71450-
ATTED-IIAT1G71450-
Functional Description ? help Back to Top
Source Description
TAIRencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Function -- GeneRIF ? help Back to Top
  1. Data show that FOREVER YOUNG FLOWER UP-REGULATING FACTOR1 (FUF1; At1g71450) acts as an activator in suppressing ETHYLENE RESPONSE DNA BINDING FACTORs EDF1/2/3/4 function and senescence/abscission of the flowers.
    [PMID: 26063506]
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT1G71450.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT1G71450
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0161620.0AC016162.5 Arabidopsis thaliana chromosome 1 BAC F3I17 genomic sequence, complete sequence.
GenBankAC0161630.0AC016163.6 Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete sequence.
GenBankBT0107640.0BT010764.1 Arabidopsis thaliana At1g71450 gene, complete cds.
GenBankBT0117900.0BT011790.1 Arabidopsis thaliana At1g71450 mRNA, complete cds.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_177301.11e-135Integrase-type DNA-binding superfamily protein
SwissprotQ9C9I21e-136ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A178W3R11e-133A0A178W3R1_ARATH; Uncharacterized protein
STRINGAT1G71450.11e-134(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Representative plantOGRP6161718
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Nakano T,Suzuki K,Fujimura T,Shinshi H
    Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
    Plant Physiol., 2006. 140(2): p. 411-32
    [PMID:16407444]
  3. Ma S,Gong Q,Bohnert HJ
    Dissecting salt stress pathways.
    J. Exp. Bot., 2006. 57(5): p. 1097-107
    [PMID:16510518]
  4. Chen WH,Li PF,Chen MK,Lee YI,Yang CH
    FOREVER YOUNG FLOWER Negatively Regulates Ethylene Response DNA-Binding Factors by Activating an Ethylene-Responsive Factor to Control Arabidopsis Floral Organ Senescence and Abscission.
    Plant Physiol., 2015. 168(4): p. 1666-83
    [PMID:26063506]