PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G20613.1
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family GeBP
Protein Properties Length: 135aa    MW: 14945.1 Da    PI: 4.4533
Description DNA-binding storekeeper protein-related transcriptional regulator
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G20613.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57331.74.4e-10110135227
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktg 27 
                  +fqr+w+++Deiv+L G+id+k++ g
  AT2G20613.1 110 YFQRVWTDDDEIVVLEGFIDYKNDSG 135
                  79********************9976 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008150Biological Processbiological_process
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MSHKRFNPLT ASSSDEDELE TPIREVEDSS SDEETDSDSD SELGKKDEVV TEVSALNNQE  60
SKSVKISEKS VAKRSRETHE AQASADVKKA KKVKKRGGGG GEEAETKKAY FQRVWTDDDE  120
IVVLEGFIDY KNDSG
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO183994140.0
Expression AtlasAT2G20613-
AtGenExpressAT2G20613-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G20613.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G20613
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0070480.0AC007048.5 Arabidopsis thaliana chromosome 2 clone F23N11 map mi148, complete sequence.
GenBankCP0026850.0CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_179651.11e-91DNA-binding storekeeper protein-related transcriptional regulator
SwissprotQ8S8D69e-93STKLG_ARATH; Probable transcription factor At2g20613
TrEMBLA0A178WF601e-28A0A178WF60_ARATH; Uncharacterized protein
STRINGAT2G20613.14e-91(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31328181