PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT5G65100.1
Common NameEIL5, MQN23.3
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family EIL
Protein Properties Length: 557aa    MW: 63689.6 Da    PI: 4.5323
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT5G65100.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3457.11.3e-139384421353
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn..........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                  ++lkkrmwkd++l+++lk++k+++l++  ++    t+               +++e++rrkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv
  AT5G65100.1  38 DDLKKRMWKDRNLMCKLKQQKRDNLNSVISSpsssTS----AsssssssvivRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPV 131
                  79*********************99665554434333....24455899************************************************* PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
         EIN3  85 egasdsLraWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                  +g+sdsLr+WWke+v+fd+++p+a+s+y   +a++li+s+es +   ++s+ h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWP+G+el
  AT5G65100.1 132 TGSSDSLRRWWKENVQFDQTAPNAVSDYltlAAAQLISSNESLD---PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTEL 226
                  ******************************999****9988877...99************************************************* PP

                  HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX..XXXXXXXX CS
         EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss..slrkqspk 273
                  wwge+g ++ ++g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake++++++vlnqee+ +++++ +  +     +++ +
  AT5G65100.1 227 WWGEQGaAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLNRLKISdDEdeDRDQEQAR 324
                  ******9999999********************************************************************99995333232234445 PP

                  XXXXXXXXXXXX.....XXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXXXXXXXXXX......X CS
         EIN3 274 vtlsceqkedve.....gkkeskikhvqavktta....................................gfpvvrkrkkkpsesakvsskevsrtcq 330
                  +t+ +++   ++     +++e+   +++++k+ +                                    ++p+ +krk +++e++++ s+  ++tcq
  AT5G65100.1 325 FTCFDQEPSLNTcfivgQDQEPL-GSMRKDKRVDqefssndcflvaqdqeprkgkkadqewspnscflvdQEPLGNKRKGEFVEKEAMLSN--VYTCQ 419
                  5555554444449***5555555.78999999889******************************************************99..7**** PP

                  XXXXXX.XXXXXXXXXXXXXXXX CS
         EIN3 331 ssqfrgsetelifadknsisqne 353
                  +s++++s+++l+f dkn ++ +e
  AT5G65100.1 420 NSSCPSSDVSLGFVDKNLRTGHE 442
                  ********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.9E-12538302No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-67178309IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-58180305IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009046anatomyflower
PO:0007611developmental stagepetal differentiation and expansion stage
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    Send to blast
MVEVQDLEPL SPIQDYDEDD LEEDVDEFER FGEEISYDDL KKRMWKDRNL MCKLKQQKRD  60
NLNSVISSPS SSTSASSSSS SSVIVRRTEA SRRKKMARSQ DSVLKYMMKI MEVCKAQGFV  120
YGIVPEKGKP VTGSSDSLRR WWKENVQFDQ TAPNAVSDYL TLAAAQLISS NESLDPNSYI  180
HMLHELQDTT LGSLLSALMQ HCVPPQRRFP LEKGLAPPWW PNGTELWWGE QGAAAFEHGP  240
PPYRKPHDLR KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRVLNQ  300
EEARLNRLKI SDDEDEDRDQ EQARFTCFDQ EPSLNTCFIV GQDQEPLGSM RKDKRVDQEF  360
SSNDCFLVAQ DQEPRKGKKA DQEWSPNSCF LVDQEPLGNK RKGEFVEKEA MLSNVYTCQN  420
SSCPSSDVSL GFVDKNLRTG HEIECLYGTP ELVNQSSGGG SDGFVRSITT SDDDYSASSK  480
AEDTRDYHNQ DGNWLDYLWF ERLHDLNFSD QGFEDQTSTV DLNQLPDHSD SNQTMNEDDI  540
SLWDMGCEDK DIYMSQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561783081130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561783081130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO184249110.0
Genevisible247226_at0.0
Expression AtlasAT5G65100-
AtGenExpressAT5G65100-
ATTED-IIAT5G65100-
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT5G65100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT5G65100
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0133950.0AB013395.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23.
GenBankCP0026880.0CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_201315.10.0Ethylene insensitive 3 family protein
SwissprotQ9FJQ50.0EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A178UP500.0A0A178UP50_ARATH; Uncharacterized protein
STRINGAT5G65100.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58792747
Representative plantOGRP5631682
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Rieu I,Mariani C,Weterings K
    Expression analysis of five tobacco EIN3 family members in relation to tissue-specific ethylene responses.
    J. Exp. Bot., 2003. 54(391): p. 2239-44
    [PMID:12909687]
  3. Jiao Y, et al.
    A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development.
    Plant Physiol., 2003. 133(4): p. 1480-93
    [PMID:14605227]
  4. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  5. Binder BM, et al.
    The Arabidopsis EIN3 binding F-Box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling.
    Plant Cell, 2007. 19(2): p. 509-23
    [PMID:17307926]