PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan000319
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 646aa    MW: 73515.5 Da    PI: 8.8395
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41934014PU_unrefUnigeneView CDS
gnl|UG|Aan#S41948132PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-9005PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-07464505240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W +eE ell ++ +++++g   +W+ I++++g+gR+ +++
        Aan000319 464 KPWGKEEIELLRKGTAKYPKGtsrRWEVISEYIGTGRSVEEI 505
                      68***********************************99876 PP
2Myb_DNA-binding26.51.5e-08591634344
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 
                       W++  +  lv+a k ++++   +W+++a+ ++ g+t +qck  +
        Aan000319 591 VWSAVQETALVQALKTFPKEtnqRWERVAAAVP-GKTVNQCKKQF 634
                      6********************************.********877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF465653.4E-2093176IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1102.4E-2095200IPR001623DnaJ domain
SMARTSM002712.2E-1397172IPR001623DnaJ domain
CDDcd062573.49E-1298169IPR001623DnaJ domain
PROSITE profilePS5007618.16698180IPR001623DnaJ domain
PfamPF002265.8E-1798177IPR001623DnaJ domain
PRINTSPR006252.2E-7103121IPR001623DnaJ domain
PRINTSPR006252.2E-7121136IPR001623DnaJ domain
PRINTSPR006252.2E-7152172IPR001623DnaJ domain
PROSITE patternPS006360157176IPR018253DnaJ domain, conserved site
SuperFamilySSF466895.3E-7458506IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-4458505IPR009057Homeodomain-like
PROSITE profilePS512935.99461516IPR017884SANT domain
SMARTSM007172.0E-6462515IPR001005SANT/Myb domain
PfamPF002495.1E-6464505IPR001005SANT/Myb domain
CDDcd001677.77E-5465505No hitNo description
PROSITE profilePS512939.396587642IPR017884SANT domain
SMARTSM007172.1E-9588640IPR001005SANT/Myb domain
SuperFamilySSF466898.97E-9590641IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.0E-5591634IPR009057Homeodomain-like
PfamPF002491.2E-6591634IPR001005SANT/Myb domain
CDDcd001673.87E-6592638No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 646 aa     Download sequence    Send to blast
MASRSSILRI TYSNELVNGE TVYVSSNSHP IKASHFEPAG HSFHDIALKL RGYYEEESLS  60
DDNENLPKDK EYDYMQSSGA YSSSKGKKKN AEGKTQQDHY ALLGLGNLRY LATEEQIRKS  120
YREAALKHHP DKQAALLLGE ATEAAKEAKK DEIENHFKAI QEAYELLMDP VRRRIYDSTD  180
EFDDEIPTDC SPQDFFKVFG PAFMRNGRWS VNQPAPMLGD DNTPLNVVDA FYDFWFSFKS  240
WREFPSDEDF DLEQAESRDH RRWMERQNAK NSEKARKDEH TRIRTLVDNA YKRDPRIIKL  300
KEMIKAEKQK KKEAKYAVKK QQEEEAARIA EENRRKKEEE EKQAAEAASN QKKLKEKEKK  360
LLRKERTRLR ALSTHVVANN LLNITQDDVE NICLSFDMLQ LQTLCENMEG KGKDSQSQAE  420
LLKEAINSDN IEKDRAVDNS QQNGSVKSKV NGTISTSNFE KKPKPWGKEE IELLRKGTAK  480
YPKGTSRRWE VISEYIGTGR SVEEILKATK TVLLQKPDSS KAFDTFLDKR KPTVSIASPL  540
TTREEVVGVP VGASSTSTPT ATSAQPDVVP PKPSESAVKV EAAASSSDQD VWSAVQETAL  600
VQALKTFPKE TNQRWERVAA AVPGKTVNQC KKQFILLKEK FRSNKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A1e-1318729713123Zuotin
5dje_B1e-1318729713123Zuotin
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333354RRKKEEEEKQAAEAASNQKKLK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.42100.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022029331.10.0dnaJ homolog subfamily C member 2-like
TrEMBLA0A2U1NVV20.0A0A2U1NVV2_ARTAN; DnaJ domain, Myb-like DNA-binding domain protein
STRINGXP_010067661.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.11e-122DnaJ domain ;Myb-like DNA-binding domain