PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan000926
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family NAC
Protein Properties Length: 305aa    MW: 34892 Da    PI: 5.6011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41924444PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-76502PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-76503PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.92.4e-50211541127
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                lppGfrFhPtdeel+v+yL +k ++ +      +  ++i++vd+yk+ePwdLp+++  ++kewyfF++rd+ky++g+r+nr+t++gyWkatg dk+++sk
  Aan000926  21 LPPGFRFHPTDEELIVHYLSHKSRSMSaiasvASPPSIIADVDLYKHEPWDLPEMALFGTKEWYFFTPRDRKYPNGSRPNRVTRNGYWKATGADKPIKSK 120
                79*********************999976554222348***************77667999**************************************9 PP

        NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyr 127
                   + +vg+kk Lvfy g+  kg kt+W+mheyr
  Aan000926 121 sdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 154
                666677***************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-6012172IPR003441NAC domain
PROSITE profilePS5100556.90221172IPR003441NAC domain
PfamPF023651.5E-2722154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MRSPTKHVTK TVRDAEAKLN LPPGFRFHPT DEELIVHYLS HKSRSMSAIA SVASPPSIIA  60
DVDLYKHEPW DLPEMALFGT KEWYFFTPRD RKYPNGSRPN RVTRNGYWKA TGADKPIKSK  120
SDPKVTVGIK KALVFYAGKG TKGIKTNWIM HEYRHPAPSR LDDWVLCRLY NKKNNPKEMI  180
IPPQDNNTSP LDELQSEQKY SDNISGSLDS FEHSDGDYGG KIDSDFMFLG DLEPETSTKT  240
NDTSDQCDMG LIYSLMQKEE LDDGNNWLDG LSLEDLHHCL EAMPTSYDIL WDANDSNQQK  300
NFFEY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-74131747170Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.73760.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in stems, leaf blades and callus. Weakly expressed in developing flowers. {ECO:0000269|PubMed:10660065}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023741738.11e-141NAC domain-containing protein 67-like
RefseqXP_024986100.11e-141NAC domain-containing protein 67-like
SwissprotQ52QH42e-76NAC68_ORYSJ; NAC domain-containing protein 68
TrEMBLA0A2U1KV020.0A0A2U1KV02_ARTAN; NAC domain-containing protein 68
TrEMBLA0A2U1MBV50.0A0A2U1MBV5_ARTAN; NAC domain-containing protein 68
STRINGXP_008782755.14e-78(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.19e-66NAC family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Taga Y, et al.
    Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
    Plant Signal Behav, 2009. 4(8): p. 740-2
    [PMID:19820348]
  3. Xia N, et al.
    Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
    Mol. Biol. Rep., 2010. 37(8): p. 3703-12
    [PMID:20213512]
  4. Takasaki H, et al.
    The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
    Mol. Genet. Genomics, 2010. 284(3): p. 173-83
    [PMID:20632034]
  5. Nakayama A, et al.
    Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
    BMC Plant Biol., 2013. 13: p. 150
    [PMID:24093634]
  6. Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
    IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
    Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
    [PMID:26766411]