PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan000961
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 289aa    MW: 31978.7 Da    PI: 5.7669
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41934458PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-120994PU_refplantGDBView CDS
PUT-183a-Artemisia_annua-120995PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10138182554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h+++Er RR+ri +++  L+el+P++      K +Ka++L +  +Y+k L
  Aan000961 138 HSIAERLRRERIAERMRALQELVPSC-----NKTDKAAMLDEILDYVKFL 182
                99***********************8.....6****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.27E-11131187No hitNo description
SuperFamilySSF474595.5E-16131192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.577133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-16135193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-7138182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-11139188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MASDPPEGYG DDFLEQILAI PSSYNNNIDH HQQQQQTVFP LGLSLDNGAA QFTPAHQQQQ  60
QQQQRERGGG NMNMSGLFPS AHHQFENNMH PSQQHSLLHT VPQAFQGQPT TSTAVTVAHP  120
PSIRPRVRAR RGQATDPHSI AERLRRERIA ERMRALQELV PSCNKTDKAA MLDEILDYVK  180
FLRLQVKVLS MSRLGGAGAV AQLVSDVPLQ SVEGDANENG YNQPAWENWS NDDTEREVAK  240
LMEEDVGAAM QFLQSKALCI MPISLASLIY PTQQPDTSSL VKPEPSAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147RLRRER
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.79180.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023735651.11e-161transcription factor UNE12-like
SwissprotO227688e-82UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A2J6MC811e-160A0A2J6MC81_LACSA; Uncharacterized protein
STRINGPGSC0003DMT4000348401e-125(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.34e-79bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]