PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan001275
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family B3
Protein Properties Length: 582aa    MW: 64929.7 Da    PI: 8.5619
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55122473PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-103449PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-103450PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.8e-16122212199
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                f+k ++ s+v++  ++ +p +f++++    + ++ ++ e e+g+++e+k+    ++ +  l++GW+ F+ +++L egD+++F+l+ + +f  +v+++r+
  Aan001275 122 FKKLMLASHVTRCFWMGIPTPFCRSFLP--QHDFLVIAEGENGKQYELKY--LAHKTG--LSAGWRTFAVSHKLHEGDVLIFQLVASCKF--KVHIVRA 212
                8999*******************99953..36789***************..666655..9***********************998888..8988886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.4E-18116213IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-21116213IPR015300DNA-binding pseudobarrel domain
CDDcd100172.53E-24120211No hitNo description
PROSITE profilePS5086312.661122213IPR003340B3 DNA binding domain
SMARTSM010193.2E-19122213IPR003340B3 DNA binding domain
PfamPF023625.2E-14122212IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MAETAQVIEA VISDLQIDKT PKSLEAQVTI AHASPLASFA PFTPSAQIKR KRLKPAGYDL  60
AFLNEKKKAS KNKAVRDPSK ASLSSAKKKT TPKDPNAPVQ ISPTMIRAEE IQSSLGNEFP  120
TFKKLMLASH VTRCFWMGIP TPFCRSFLPQ HDFLVIAEGE NGKQYELKYL AHKTGLSAGW  180
RTFAVSHKLH EGDVLIFQLV ASCKFKVHIV RASDSKEVDG TLTLFNHDVH MGVSDSKEVD  240
GALNLLNHDA HTGAGDPKEA DGTPDLSNHD AHTRASDPKE VDGTPDLSNH DAHTRASDPK  300
EVDGTPELLN HDAHTRASDP KEVDGTLDVP NHNVHTIRIP SATWARNSKP RGRKRLGSSS  360
PPLAKVQKKK QNMSESPTQI SNHTMDSSGV NSEVHAASPE PNISSEKLKT FKDFRIRVNK  420
QCIDSELSEE IRKTYFKLCI RKKEILHNGV RKGLYPKLVA GMIGEMVNIA NMIKNCNFNT  480
TKEEFEVWDS SLKSFELMGM KVGFLRDRIH ELIALAFESE DAKRYMEASE EQKQNANTIQ  540
NLEEKLLELK ENNKKIDAIV SSLKEKMEKN EVEFKKHVDA PW
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.34000.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023767912.11e-161B3 domain-containing protein Os01g0234100-like
TrEMBLA0A2U1NY330.0A0A2U1NY33_ARTAN; DNA-binding pseudobarrel domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-35B3 family protein