PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan001331
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ARR-B
Protein Properties Length: 534aa    MW: 60189.7 Da    PI: 6.4232
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41889061PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-94679PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.18.3e-28299351255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +++Wt+eLH++Fv+aveqL G ++A+P++ilelm+v+gLt+++v+SHLQkYRl
  Aan001331 299 IKVDWTSELHKKFVQAVEQL-GVDQAIPSRILELMNVEGLTRHNVASHLQKYRL 351
                5899****************.********************************8 PP
2Response_reg33.32.5e-12201261109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+ d++ + ++ +r+ le+ +y +v+++ ++ eal  + +k   +++ ++ ++  + dG   +k +++++ +lp i+ +  +  +++ +++ +Ga 
     Aan001331  20 VLLLDEDINSANEIRSKLEEMDY-VVTTFYTANEALSAISDKSksFHVAIVEVRADNEDGR--FKFLESAK-ELPTIMTSNVNCISTIMKCIALGAV 112
                   789999999999***********.***************666556***************5..55565555.899999999999************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   +fl+Kp ++++l++
     Aan001331 113 EFLEKPLSEDKLRN 126
                   ***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.9E-1716149No hitNo description
SuperFamilySSF521725.41E-1616134IPR011006CheY-like superfamily
SMARTSM004480.003418128IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011021.14419132IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.0E-820127IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.04E-921132No hitNo description
PROSITE profilePS5129414.132295354IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.0E-27296354IPR009057Homeodomain-like
SuperFamilySSF466892.15E-18297354IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-25298352IPR006447Myb domain, plants
PfamPF002492.8E-8301350IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MVCTANDLLE WKDFPKGLRV LLLDEDINSA NEIRSKLEEM DYVVTTFYTA NEALSAISDK  60
SKSFHVAIVE VRADNEDGRF KFLESAKELP TIMTSNVNCI STIMKCIALG AVEFLEKPLS  120
EDKLRNIWQH VAHKAFNAGP KDQAEALKSK NASAPEVDLK TDIKVEVSQN QEHNVEVSVE  180
SDKYPAPSTP QLKHGIRLVD NGDCQDHEHD HDQDQTNIST EKECVDHDDP SKFVETICKD  240
LVVYTTVITE TTSSKSLEEG ILKPSTSECS PDPKVDGKKP NEASENPSSR ATKSSRRKIK  300
VDWTSELHKK FVQAVEQLGV DQAIPSRILE LMNVEGLTRH NVASHLQKYR LQRRHILPKE  360
SARKWPQTRH STPRNYYPPR PIMAYPPYHS NHTLPANQVY PAWPPPPNYA PPPQMWSPPY  420
YQAWHSSENW TWNPYPGVPA EAWGCPTLPA HPSFPQNASE YQSRNSMQSG QTMPKNSLDN  480
YPGDEVIDKV VKEAINKPWL PLPLGLKPPS TESVISELSR QGISTVPPRI NSSR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-16294356163ARR10-B
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.710.0leaf
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022018262.10.0two-component response regulator-like APRR2 isoform X1
RefseqXP_022018263.10.0two-component response regulator-like APRR2 isoform X1
RefseqXP_022018264.10.0two-component response regulator-like APRR2 isoform X1
RefseqXP_022018265.10.0two-component response regulator-like APRR2 isoform X1
RefseqXP_022018266.10.0two-component response regulator-like APRR2 isoform X1
SwissprotQ6LA431e-129APRR2_ARATH; Two-component response regulator-like APRR2
TrEMBLA0A2U1PBI70.0A0A2U1PBI7_ARTAN; CheY-like two-component responsive regulator family protein
STRINGVIT_02s0012g00570.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.61e-122ARR-B family protein
Publications ? help Back to Top
  1. Gong L, et al.
    Transcriptome Profiling of the Potato (Solanum tuberosum L.) Plant under Drought Stress and Water-Stimulus Conditions.
    PLoS ONE, 2015. 10(5): p. e0128041
    [PMID:26010543]