PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan001916

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

G2-like

Protein Properties

Length: 385aa MW: 42482.2 Da PI: 7.2345

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41945666	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-1160988	PU_ref	plantGDB	View CDS
PUT-183a-Artemisia_annua-137258	PU_unref	plantGDB	View CDS
PUT-183a-Artemisia_annua-61700	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4e-32	226	281	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Aan001916 226 KARRCWSPELHRRFLHALQQLGGAHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 281 68****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.032	223	283	IPR017930	Myb domain
SuperFamily	SSF46689	6.66E-18	224	284	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.2E-28	224	284	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.1E-27	226	281	IPR006447	Myb domain, plants
Pfam	PF00249	2.2E-7	228	279	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence Send to blast
MVFDHHNNTS DFNEKMQRCR DYMEALETER KKIQVFEREL PLCLELVTQA IEGCKQQMSG 60 TTTEYFNGQS ECSEQTSSEG PILEEFIPMK RISSVDEDDQ EHHHQQVVNN NNKPKIISSK 120 LDIKSSLSKK SDWLRSAQLS IQSPDPVDVS PKIVPVVEVK RNGNGAFHPF KKEKSAEDAV 180 AGVTAKLSVT PARDPAAAAS STAETGTRSG GCDESKSEDK GQSNRKARRC WSPELHRRFL 240 HALQQLGGAH VATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRPSPPMH NNNNSQTPQF 300 VVVGGIWMPP QEYNNAMGTA STPTSGDTNN SKGVYAPIAS RPMSIAEASM SLNKSNSGEK 360 DGEHSHENSP STSSSTHTTT ASPAF

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence Send to blast

MVFDHHNNTS DFNEKMQRCR DYMEALETER KKIQVFEREL PLCLELVTQA IEGCKQQMSG  60
TTTEYFNGQS ECSEQTSSEG PILEEFIPMK RISSVDEDDQ EHHHQQVVNN NNKPKIISSK  120
LDIKSSLSKK SDWLRSAQLS IQSPDPVDVS PKIVPVVEVK RNGNGAFHPF KKEKSAEDAV  180
AGVTAKLSVT PARDPAAAAS STAETGTRSG GCDESKSEDK GQSNRKARRC WSPELHRRFL  240
HALQQLGGAH VATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRPSPPMH NNNNSQTPQF  300
VVVGGIWMPP QEYNNAMGTA STPTSGDTNN SKGVYAPIAS RPMSIAEASM SLNKSNSGEK  360
DGEHSHENSP STSSSTHTTT ASPAF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-13	226	279	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-13	226	279	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-13	226	279	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-13	226	279	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-13	226	279	2	55	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023746281.1	0.0	transcription factor HHO3-like
Swissprot	Q9FPE8	1e-101	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A2U1M7P7	0.0	A0A2U1M7P7_ARTAN; Homeodomain-like protein
STRING	VIT_01s0011g03110.t01	1e-139	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	9e-92	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]