PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan002153
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ZF-HD
Protein Properties Length: 361aa    MW: 39294.6 Da    PI: 8.0205
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41967454PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-85120PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer110.49.9e-3564120459
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  v+YkeClkNhAa++GghavDGCgEfmps+++  +++++lkCaACgCHRnFHRre++e
    Aan002153  64 VTYKECLKNHAATMGGHAVDGCGEFMPSPTSVpTDPTSLKCAACGCHRNFHRREPDE 120
                  79**************************99999********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257746.0E-2147117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.9E-2964118IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.1E-3165117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152327.17266117IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466894.07E-18210283IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-28213283IPR009057Homeodomain-like
TIGRFAMsTIGR015651.1E-25224280IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
METTSPPPPT TTTTTTTPTT TTITNPADPP DHLIQPNNLP PPFTNGVLKR HKPRHHQQHN  60
PIIVTYKECL KNHAATMGGH AVDGCGEFMP SPTSVPTDPT SLKCAACGCH RNFHRREPDE  120
VSFLNTNPIQ HVIEYQPHHR HHPPPPPPPQ PLTIAPPPPQ TDNTSSPAES PSPPPISSSY  180
YPSAPHMLLA LSTGAAGGTV SAPPHMENTS GGGGGLSFSN PNSKKRFRTK FTQDQKQKMH  240
ELAERVGWKM QKKDEDLILG FCNEIGVDRG VFKVWMHNNK MTLGNIKKDT VTSHTENHHN  300
GSSGGIGIGI DFLSQRDNNN NQQLLQHQHQ HQQQHQQQHN NDSVSSGGGN VIGTNASSSS  360
S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A4e-182232801673ZF-HD homeobox family protein
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.6130.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023758368.11e-117zinc-finger homeodomain protein 9-like
TrEMBLA0A2U1L5E41e-125A0A2U1L5E4_ARTAN; Zinc-finger homeodomain-containing protein 9
STRINGXP_010257380.13e-87(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-58homeobox protein 34