PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan002302
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GeBP
Protein Properties Length: 347aa    MW: 38452 Da    PI: 5.0892
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41944466PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-339160989PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-339160990PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573902.7e-28128225298
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98 
                lf rlwsee ei l+ G++++ ++ +k+p ++i++f+efvk+ ++++v++sq+++K++rL+kKf+++ +k  ksgk  +fs++h++ +++ls+ +Wgs
  Aan002302 128 LFARLWSEENEIELIEGMLNYVNEIKKDPIAEINDFHEFVKNDVHVDVTTSQMLNKVKRLRKKFENNYAKfEKSGKVRTFSNPHEKRMYDLSQNLWGS 225
                799******************************************************************9899***********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.1E-26129224IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MAGSENEHTN SSTSGEEEEE QESTQASDSE PESEPEKTPQ KQTLTPTLSS SDESDSDDGE  60
TPAIAPVKEV EKPRSKNQSA SPAVGKRPAA EIGGGDVKRV RKETVVAVAA PDSINGGGAA  120
DRKDPKQLFA RLWSEENEIE LIEGMLNYVN EIKKDPIAEI NDFHEFVKND VHVDVTTSQM  180
LNKVKRLRKK FENNYAKFEK SGKVRTFSNP HEKRMYDLSQ NLWGSEGNNN VAKPSKKINV  240
TSKVNKGKKS GLGNGNVNME FEVEPKMVQP VRSWRGPEQL GSMGLMVTDE GIMSKGLELL  300
TGAKKVEMEE KWKELKVQEL EHFVRKVELL KEQAEVVLDA VTRSGAN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.196100.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024963662.11e-108GLABROUS1 enhancer-binding protein-like
TrEMBLA0A2U1NRZ00.0A0A2U1NRZ0_ARTAN; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.15e-23DNA-binding storekeeper protein-related transcriptional regulator